Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1564 ATGGAGTCCGCTGCTGGGGATACCGATGCATCACGGATTCTTGCTGAACTTGAGTCGTTGAGGGATACAAAAAGTGATATAGAGCAAAGAATTTCAGTACTTGATGCTCATCTCCGCGAAATTAATCTCCACAATGAGTTATCGAACGGTGACTCTTGCTCTCCTACCTCCGTTATCAATTCGAACTACACGAACGGATTGTCCCCTGATATGATTTACAGATACTGCCGGCAGCTTTTGGTTCCTACTTTCGGCGTTGAAGGGCAGGCAAATCTCTTGAAGTCATCGATTTTAGTTGTGGGAGCTGGAGGTTTGGGTTCTCCTGCATTGTTATACCTTGCTGCTGCTGGGGTTGGTCGCTTGGGTATTGTTGACCATGACCTGGTTGAGCTGAATAATATGCACCGGCAGGTAATTCACACCGAATCATATATTGGTCAGCCAAAAGTGAAATCTGCTGGTTCTGCTTGTCACAAATATGACATAATAATATATGCAACAGATAATGCTCCAAGCCGCTATATGATCAGTGATTGCTGTGTAGTTTTAGGAAAGCCTCTGGTATCAGGTGCTGCACTAGGTTTGGAAGGCCAGCTTACTGTTTACAATTACAAGGGTGGCCCATGCTATCGATGTCTATTTCCAACTCCACCACCTACAACAGCTTGTCAAAGATGTGCTGATAGTGGAGTTCTAGGTGTAGTTCCTGGTGTTATCGGTTGTCTCCAAGCTTTAGAGGCCATCAAGATTGCTAGTGCTGTTGGTGAATCACTCTCTGGAAGGATGCTTCTCTTTGATGCTTTGTCTGCACGGATTCGTATTGTAAAAATTAGGGAAAGGTCTTTGCAATGCGAAGTTTGTGGAGAGAATTTAACATTTACTCAACAGCACTTTCGAGAATTTGATTATGAGAAATTCACTCAGACTCCCCTGACCGTGTCACCTTTGAAGCTGAACCTTCTTCCTGTAGAATCAAGAATTAGCAGCAAGCAATACAGCGAAATAATTAGCAAGAAAGAACCTCACGTGCTGGTGGATGTGAGACCAGCTCACCATTTCAAGATTGTGTCACTCCCAAAGTCCTTGAACATTCCACTTTCAACCTTGGAGACTAGTTTGCCCGAGATATCATCGGCTATAAATAAAGAAGAGGACGATGTCGGTGTAGCTTCTGGTTCAGGCGTGCAATTGTATGTTGTATGTCGAAGAGGAAACGATTCTCAGCTAGCTGTTCAGTATCTTCAGAAGATGGGTTTTGCTTCTGCCAAGGACAGTATGGGAGGCCTGGAATCTTGGTCCAACGATGTGGACCCAAACTACGCTTCATATTAG 1332 0.4429 MESAAGDTDASRILAELESLRDTKSDIEQRISVLDAHLREINLHNELSNGDSCSPTSVINSNYTNGLSPDMIYRYCRQLLVPTFGVEGQANLLKSSILVVGAGGLGSPALLYLAAAGVGRLGIVDHDLVELNNMHRQVIHTESYIGQPKVKSAGSACHKYDIIIYATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGVIGCLQALEAIKIASAVGESLSGRMLLFDALSARIRIVKIRERSLQCEVCGENLTFTQQHFREFDYEKFTQTPLTVSPLKLNLLPVESRISSKQYSEIISKKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLETSLPEISSAINKEEDDVGVASGSGVQLYVVCRRGNDSQLAVQYLQKMGFASAKDSMGGLESWSNDVDPNYASY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1564 443 Coils Coil 10 30 - -
Lele25g1564 443 Pfam Rhodanese-like domain 330 434 IPR001763 -
Lele25g1564 443 FunFam Adenylyltransferase and sulfurtransferase MOCS3 159 292 - -
Lele25g1564 443 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 72 158 IPR045886 -
Lele25g1564 443 CDD ThiF_MoeB_HesA_family 74 277 - -
Lele25g1564 443 FunFam Adenylyltransferase and sulfurtransferase MOCS3 325 443 - -
Lele25g1564 443 Pfam ThiF family 75 156 IPR000594 -
Lele25g1564 443 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 34 443 IPR028885 GO:0002143|GO:0004792|GO:0005829
Lele25g1564 443 ProSiteProfiles Rhodanese domain profile. 338 441 IPR001763 -
Lele25g1564 443 SMART rhod_4 328 438 IPR001763 -
Lele25g1564 443 Gene3D - 325 443 IPR036873 -
Lele25g1564 443 Gene3D - 65 156 - -
Lele25g1564 443 Gene3D - 157 292 - -
Lele25g1564 443 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 67 410 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1564 Lele-ChrLele25 12702672 12721232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1564 118 443 Sulfurtransferasese or Rhodanese AT5G55130 65.625 1.07e-169 479