Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1525 ATGGTGATGGCGATACTGAATTGGATACTGGACACTGCGAAGAACTTCGCTCACGAGCACGCACAGGTGATACCTATTTCGCTCTTCGTGGCTGTTCTCTGCCTCTGCTTGCTCATCAGTCACTTGCTCGAAGAAAACCGTTGGGTTAATGAATCCATCGTCGCCATTCTAGTTGGATGTGTTGCTGGAGTGATACTCTTGTTCGTCACCAAGGGGAAGAGTTCTCGCATCCTCACATTTGATGAAGAACTGTTCTTCGTATATCTTCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTTTTGACTATCATGCTATTTGGGGTGATCGGTGTTTTGATATCAACATCTATTATTGTATCTGGCAGCTGGTGGCTATTTCCCAAATTAAACTTTGTTGGTCTGAGTGTGCAAGATTATCTTGGTGAGATTTCTTCTATAGGAACAATTTTCTCTTCAACAGATACAGTTTGTACCTTGCAGGTTCTCCATCAAGATGAAACTCCTTTATTGTACAGCCTAGTCTTTGGAGAGGGAGTGGTAAATGATGCGACGTCAGTTGTTCTCTTCAATGCAGTGCAGAAGCTTGATGCTTCAAAAGTTCATGGTAGGGCACTCCATGTCGTTGGACATTTCTTGTATCTGTTCTCCACAAGCACTGTTCTAGGATTCACTGCTGGACTTATCACAGCATACATCCTGAAAGCCTGCAGCTTTGGAAGGCAATCAAGTGTTCGTGAAATTGCATTGATGGTTTTAATGGCATACCTATCCTACATGTTGGCAGAGCTTCTAGAACTCAGTGGAATCCTCACTGTTTTCTTCTGCGGAATATTAATGTCACACTATGCATGGCATAATGTGACTGAAACTTCAAGAGTCACAACCAGGCATGTCTTTGCGACAATGTCATTTATTGCAGAAACCTTTATATTTCTATGCGTGGGCATGGATGCTCTGGACATGGGGAAGTGGAGGATTACCAAATTAAGTTATGGGAGTTTGATGGGAATTTACAGTTGCTTACTCTTCCTGATACTACTTGGGCGGGCTGCTTTTGTTTTCCCTCTCTCTGCTTTTGCCAACTGTATGAATAGGCATGCTCATAGAAACTCAAGAATCACATTTAGGCATCAGATAATCATTTGGTGGGCTGGGCTTATGAGGGGGGCAGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATATTCTGGAGTTACATCTGATCCTGTTGATGCAACAATGATCACCAACACCATCATTATTGTGCTTTTTAGCACACTGGTGTTTGGCATTCTCACAAAACCACTTATCCGTTATCTTCTTGCCCATAGCACAACGAGGAAGAACATCAACGGTCAGGAATCTGGTCCTCTTGCCGAGGACTTGAATCTGCCGTTGCTATCCTTTGAGGAGTCCGCAGCAACGAACATCAGTCGTGCAAAGGAAAGTCTGTCCATGTTAATAGAAAGTCCTGTTTACACCATACATCATTATTGGAGGAGGTTTGATGATGCCTACATGAGACCTATATTTGGAGGCCCTCTTGCTTAG 1581 0.4326 MVMAILNWILDTAKNFAHEHAQVIPISLFVAVLCLCLLISHLLEENRWVNESIVAILVGCVAGVILLFVTKGKSSRILTFDEELFFVYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVLISTSIIVSGSWWLFPKLNFVGLSVQDYLGEISSIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDASKVHGRALHVVGHFLYLFSTSTVLGFTAGLITAYILKACSFGRQSSVREIALMVLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTETSRVTTRHVFATMSFIAETFIFLCVGMDALDMGKWRITKLSYGSLMGIYSCLLFLILLGRAAFVFPLSAFANCMNRHAHRNSRITFRHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPVDATMITNTIIIVLFSTLVFGILTKPLIRYLLAHSTTRKNINGQESGPLAEDLNLPLLSFEESAATNISRAKESLSMLIESPVYTIHHYWRRFDDAYMRPIFGGPLA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1525 526 PANTHER SODIUM/HYDROGEN EXCHANGER 19 521 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele25g1525 526 Gene3D - 152 201 - -
Lele25g1525 526 Pfam Sodium/hydrogen exchanger family 28 447 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele25g1525 526 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele25g1525 526 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele25g1525 526 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele25g1525 526 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1525 Lele-ChrLele25 11966783 11972806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1525 14 524 Antiporters AT5G55470 71.262 0.0 754