Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1523 ATGAAAGAATCTCGTCTTGTTGCGAAGAAATTCTTGGCCAGGCCTCAACATGAAGGAGTTGGGGCTGTTGTTAGAAGAAGCATCGGACGGTTTGAGCTCAAGTACTTTGATCCTTTTCTGGTGTTGGATGAATTCTCAGGGCACAAAGGAACGATTGAAGAAGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAGATGCCTGCAGCTCAGGGAATTCAAAAGGGTCTTCAGCTTTGGATCAATCTTGCTTCCAATCATAAAATGATTGAGCCAAGGTATCAAGAGATGTTAAGCAAGGACATTGCAGAAGTAGAGGAAAACGGCATTAAAGTAAGGGTTATAGCAGGAGAAGCCTTAGGAACAAAGTCTGCAATCCAAACAAGGACTCCAACAATGTACTTAGATTTCTCTCTTAAACCTGGGGCCCACTTGCAGCAACCTATTCCAAAGTCATGGAATGCTTTTGTCTATGTTTTGGAAGGAGAAGGTGTGTTTGGCAACAAGAAATCTCAGCCTGTCTCTTCACACCATATTCTTCTTCTTGGTTCTGGTGGAGATGGTCTCGAAGTATGGAACGAGTCTTGTAATAACAATAAGGTGCTTCGGTTTGTTCTTGTTGGAGGCCAACCATTGGGTGAACCTGTGGCTCAGTTTGGACCCTTCGTGATGAACACTCAAGAAGAAATTGACCAAACCATCGATGACTTTGAGAATTGTGTCAATGGGTTTGAGAAAGCTAGGCATTGGAAATCTGAGGCTGCAATTAGTCTTAATTTTTAA 795 0.4327 MKESRLVAKKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSGHKGTIEEGDLQWMTAGRGIVHSEMPAAQGIQKGLQLWINLASNHKMIEPRYQEMLSKDIAEVEENGIKVRVIAGEALGTKSAIQTRTPTMYLDFSLKPGAHLQQPIPKSWNAFVYVLEGEGVFGNKKSQPVSSHHILLLGSGGDGLEVWNESCNNNKVLRFVLVGGQPLGEPVAQFGPFVMNTQEEIDQTIDDFENCVNGFEKARHWKSEAAISLNF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1523 264 SUPERFAMILY RmlC-like cupins 5 256 IPR011051 -
Lele25g1523 264 CDD cupin_pirin_C 135 215 - -
Lele25g1523 264 Pfam Pirin C-terminal cupin domain 138 246 IPR008778 -
Lele25g1523 264 Pfam Pirin 45 85 IPR003829 -
Lele25g1523 264 Gene3D Jelly Rolls 44 220 IPR014710 -
Lele25g1523 264 PIRSF Pirin 44 255 IPR012093 -
Lele25g1523 264 PIRSF Pirin 3 46 IPR012093 -
Lele25g1523 264 PANTHER PIRIN-RELATED 2 46 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1523 Lele-ChrLele25 11906956 11910578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1523 40 264 Calmodulin-binding Proteins AT1G50590 64.069 4.80e-103 298