Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1520 ATGATTCAGGTTCTGGATTGGTCAAGAAGAAGGGTTTTAAAGGTTCCTTTGTTGAAGCTGGATCTTATGCAAAGAGCGCCTGGGATTATAACCCTAGATTGCCTTCATGGTTTTCTGCCTCTTCCCTGTCATTCGAAACACTCCTATTCGAGTTCTTCAATCGCATTCGGTGTTTCAGTCAAAATGGGTATCTCTCGTGATTCCATGCACAAGAGGCGGGCCACTGGAGGCAAGAAGAAGGCCTGGAGGAAGAAGAGAAAGTATGAGCTTGGTAGGCAACCAGCAAACACTAAGCTATCAAGCAACAAAACGGTGAGGAGGATTAGGGTTCGAGGTGGGAATGTTAAGTGGCGTGCTTTGAGGCTTGATACTGGAAATTACTCATGGGGAAGTGAAGCCGTGACTCGCAAAACTAGAATTCTTGATGTGGTGTACAATGCATCTAACAATGAGCTGGTTCGTACTCAGACATTGGTCAAGAGTGCTATTGTTCAGGTTGATGCAGCACCTTTCAAGCAGTGGTATCTCCAACATTATGGTGTTGACATCGGTCGCAAGAAGAAGACTGCAGCTTCTTCCAAGAAGGAAGGGGAGGAAGGTGAAACTGCCACTGAGGAAGTGAAAAAGAGCAAACATGTATTGAGAAAGCTTGAGATACGTCAACAGAACCGGACACTGGATCCTCATATTGAAGAACAATTTGGAGGCGGTCGTCTATTGGCTTGCATCTCCTCTCGTCCTGGCCAATGCGGTCGTGCTGATGGATATATTTTGGAGGGAAAAGAACTGGAATTCTACATGAAGAAGCTTCAGAGGAAGAAGGGCAAGGGTGCAGGTGCTGCCTAA 846 0.4622 MIQVLDWSRRRVLKVPLLKLDLMQRAPGIITLDCLHGFLPLPCHSKHSYSSSSIAFGVSVKMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAASSKKEGEEGETATEEVKKSKHVLRKLEIRQQNRTLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1520 281 FunFam 40S ribosomal protein S8 93 222 - -
Lele25g1520 281 PANTHER 40S RIBOSOMAL PROTEIN S8 62 276 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele25g1520 281 CDD Ribosomal_S8e_like 66 258 - -
Lele25g1520 281 FunFam 40S ribosomal protein S8 170 237 - -
Lele25g1520 281 FunFam 40S ribosomal protein S8 223 276 - -
Lele25g1520 281 Pfam Ribosomal protein S8e 66 258 IPR022309 -
Lele25g1520 281 Gene3D - 222 276 - -
Lele25g1520 281 Gene3D - 93 221 - -
Lele25g1520 281 TIGRFAM eS8: ribosomal protein eS8 62 260 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele25g1520 281 ProSitePatterns Ribosomal protein S8e signature. 72 91 IPR018283 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1520 Lele-ChrLele25 11884904 11890024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1520 62 281 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.000 2.69e-127 358