Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1488 ATGCTTGATGGGGAGGTACCAAGTAAAGGTATCTTTGGCAATGCAAGTGCAATATCACTTATGGGGAATATCAAGCTTTGTGGAGGCATATCAAAGTTTGAGCTGCCACCATGCCCTATCAAATCTATTGGACAAAGAAAACATCAAAACTTGAAGTTGATCATCCCAATATGTTGCGTGATAGCTTTCCTTCTTCTGGCATCTGTTGTTGCTATTCATCATGGGAGGAAAAGAAGCAAGAAGTCTCCTTCAAGCTCTCCAACAATGGATATGATTTCAAAAGTATCATATCAAAGTTTGCATAATGCTACTGATGGATTCTCTGTTAACAACTTGATAGGATCTGGGAACTTTGGCTCTGTATATAAGGGAAGTTTTGAGCCTCAAAATGTCGTTGCGATAAAGGTCATCAATCTTCAAATCAAGGGAGCTCATAAGAGTTTTGTTGCTGAATGTAATGCAGTTAGAAATGCAAAGCATCGAAATCTGGTAAAAATTATATCATGTTGTTCGAGCATAGATTACAAGGGCCATGAATTTAAGGCTCTAGTTTATGAGTATATGGTGAATGGAAACTTGGAAAATTGGTTGCATCCTGGAATAGAAAATCTAGATCATCCAAGAATTTTGCTCCTTGATCAAATAATAAATATTCTTATCGATATTGTGTCTGCATTAAACTATCTTCACTATGAATACGGGCAACCTCTAATTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGATGGCAACATGGTTGCTCGTTTGGGTGATTTTGGATTGGCAAAACTACTCTCAGCTGTTGAAATTATTTCTAATGAACAAATCAGCACAATTGGAATAAAGGGTACTATTGGCTATGTTCCTCCAGAATATGGAATGGGTTCCGAGGTTTCAATACAAGGTGACATGTATAGCTTTGGCATTCTTGTCTTAGAGATGTTAACTAAAAGAAGACCTACTGAAGATATATTTAATGATGGTCACAATCTTCAATCATATGTGAAAATTGCATTTCCAAATAAACTTTTGGAAGTCATGAGCCCAACTATTCTTCCACGAGAATTAGAACATATGGTAGCAGCATCAGGAGACTTATCGGAGAACATGATGCAAATCCATCATAATATTGAGCAATGCTTGCATTCTTTATTTAAGATCGGACTTACATGTTCAATGGAATCACCTCATGAAAGAATGAGTGCAACTGATGTCATCAAAGAGCTAAATTCTATCAAAAGTCTTTTCCCTTTATGGTGA 1263 0.3666 MLDGEVPSKGIFGNASAISLMGNIKLCGGISKFELPPCPIKSIGQRKHQNLKLIIPICCVIAFLLLASVVAIHHGRKRSKKSPSSSPTMDMISKVSYQSLHNATDGFSVNNLIGSGNFGSVYKGSFEPQNVVAIKVINLQIKGAHKSFVAECNAVRNAKHRNLVKIISCCSSIDYKGHEFKALVYEYMVNGNLENWLHPGIENLDHPRILLLDQIINILIDIVSALNYLHYEYGQPLIHCDLKPSNVLLDGNMVARLGDFGLAKLLSAVEIISNEQISTIGIKGTIGYVPPEYGMGSEVSIQGDMYSFGILVLEMLTKRRPTEDIFNDGHNLQSYVKIAFPNKLLEVMSPTILPRELEHMVAASGDLSENMMQIHHNIEQCLHSLFKIGLTCSMESPHERMSATDVIKELNSIKSLFPLW 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1488 420 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 188 418 - -
Lele25g1488 420 PANTHER OS04G0122200 PROTEIN 2 414 - -
Lele25g1488 420 Gene3D Transferase(Phosphotransferase) domain 1 188 416 - -
Lele25g1488 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lele25g1488 420 ProSitePatterns Protein kinases ATP-binding region signature. 113 135 IPR017441 GO:0005524
Lele25g1488 420 SMART serkin_6 107 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1488 420 SUPERFAMILY Protein kinase-like (PK-like) 80 410 IPR011009 -
Lele25g1488 420 Gene3D Phosphorylase Kinase; domain 1 68 187 - -
Lele25g1488 420 ProSiteProfiles Protein kinase domain profile. 107 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1488 420 FunFam LRR receptor-like serine/threonine-protein kinase EFR 78 187 - -
Lele25g1488 420 Pfam Protein kinase domain 108 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1488 Lele-ChrLele25 11358436 11359839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1488 2 417 Receptor kinase-like Gene Family AT3G47570 45.116 1.78e-115 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele25g1488 Pkinase 7.4e-40 CL0016