Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1480 ATGGTGATGATGAAGCTGAAGATGAAGATGATGATGGGATTGCCATTAAAATACAGAGTCCTAGCTTTGTTTGCTTTGGTTATTATTATTTCCATGGTGGGTTTATCAGCTGCAGAAAGTGGTGGAAATGGATGTTCTGTGAGAAATTTCATTACCTGGGATGATATGACAGTGGATGAAAATAGCTTAGCTTCTAGATCTAAGAGTGAAAATGTTCAGGTGATTTTGGTTGACCAGAATGGAAATGGAGATTCATCTACAGTTCAAGGTGCTGTGGATATGGTTCCAGATCATAACACACAGAGAGTGAAAATATACATTTCTCCAGGAACTTACAGAGAAAAGGTGTTTGTACCAAGGAACAAGCCATATGTATCATTCATAGGGAAAAGAAATCAATCACATGGTGTTGTGATTACTTGGAACAGCAAGTCATCTGACATAGGATCAAATGGTCAAGAATTGGGGACTTATGGTTCTGCAACTGTAGCAGTAGAATCTGATTACTTCTGTGCAAATAGGATCGCTTTTGAGAACTCTGTAGTTGCAGAAGCTGGTGGACATGGAATGCAAGGAGTAGCATTGAGGATAGACAGTGACAGATCCATATTTTATCAAGTTAGATTCTTGGGAACACAAGACACACTTTTGGATAACACTGGAACTCATTACTTCTTCAAATGTTTCATCCAAGGCAAAATTGATTTCATCTGTGGCAGTGCAAGATCACTTTATGAGGATTGTCGCCTGAGGTCGACGGCTGATAACTATGGAGCAATTGCAGCTCATCACAGGGATACACCCAATGAAGAAACAGGATTCTCTTTTGTAGGCTGTTCAATCCAAGGAACTGGTAAAGTCTACCTTGGGAGAGCATGGGGAGATTATTCAAGAATCATATATTCAAACTGTTATATGGCTGATCTTATAATCCCACAAGGCTGGACTGAATGGAACCACCCTTCTAGAAAGAAGACTGCACTTTTTGGAGAGTTTCAGTGCCAAGGAAAAGGAGCAGACAGAAGAAGTAGAGTTCCATGGTCAAAATCTTTCACTTATGAGCAAGCAAGGCCTTTTCTTGACAGAAGCTTCATCAATGGAGACCAATGGCTTAGACTGTAG 1122 0.402 MVMMKLKMKMMMGLPLKYRVLALFALVIIISMVGLSAAESGGNGCSVRNFITWDDMTVDENSLASRSKSENVQVILVDQNGNGDSSTVQGAVDMVPDHNTQRVKIYISPGTYREKVFVPRNKPYVSFIGKRNQSHGVVITWNSKSSDIGSNGQELGTYGSATVAVESDYFCANRIAFENSVVAEAGGHGMQGVALRIDSDRSIFYQVRFLGTQDTLLDNTGTHYFFKCFIQGKIDFICGSARSLYEDCRLRSTADNYGAIAAHHRDTPNEETGFSFVGCSIQGTGKVYLGRAWGDYSRIIYSNCYMADLIIPQGWTEWNHPSRKKTALFGEFQCQGKGADRRSRVPWSKSFTYEQARPFLDRSFINGDQWLRL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1480 373 SUPERFAMILY Pectin lyase-like 74 371 IPR011050 -
Lele25g1480 373 FunFam Pectinesterase 70 373 - -
Lele25g1480 373 Pfam Pectinesterase 75 368 IPR000070 GO:0030599|GO:0042545
Lele25g1480 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 372 - -
Lele25g1480 373 Gene3D - 72 373 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1480 Lele-ChrLele25 11112901 11114979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1480 8 325 Carbohydrate Esterase AT5G55590 53.412 4.63e-131 377