Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1474 ATGGCCAGTAATGGGGCAATGGAGCCCTTGATCCCACAATTACCGGATCCAGCAGCTCCAAGAACAAATGGCCAGGTTGGCAGGAGAAGGTTTCTCCGTTGTAAAAGTGCTCCTCTTGCTAATCTTGATCCACCTGAGAAAACCGACATTGGCTCAATTCAACGTTCCCAGTCCATTTTTGGGAAGTTGCATCCAAGTTTTCGACTTGTGGCTATATATCTTGTAGGGTATTTAGGTATTGGAGCTGTGATCTTCTATCTTGTCAGGCACCAGATCTCAGGGAAGAAAACAAAGGGTGTCCTTGATGCAATATACTTTACAATTGTCACGATGACCACAGTTGGATATGGAGACCTTGTGCCAAATAGTGACCTTACAAAACTACTTGCCTGTGCTTTTGTCTTCACAGGAATGGCACTAGTTGGTTTAATCTTAAGCAAAGCAGCAGACTACTTGGTTGAGAAGCAGGAAGTTTTGCTAGTCAAAGCTCTGCATGGGAATGGTCCAACTCAAATTCTAAAGGAGGTTGAGGTCAACAAGACGAGATATAAATTTTATGTGGTATTTTTCCTGCTTTTGGTGCTCATTGTTACGGGGACAATTTTCTTAGTTGCTGTTGAGAAGTTGGATGTTATCGATGCCTTCTATTGTGTTTGTTCTACAATAACCACCCTGGGTTATGGTGATAAAAGCTTCTCAAGTGAAGGAGGTAGAGTCTTTGCTGTGTTTTGGATATTGACAGGAACTATTTGTTTAGGTCAGCTTTTCCTTTACATTGCTGAGCTGAACACTGAAAGAAGACAAAAGGAAGTCATTGAGATTGTTCTTAATCGGAGGACAACCAATGCAGACTTGGAGGCCGCAGATATTGATGATGATAGAACTGTTGGGGTTGCTGAGTTCATTATCTATAAGCTCAAAGAGATGGGGAAGATAAGTCAAGAAGATGTCTCACTCGTAATGAAGGAGTTTAAGGAGCTTGATTTTGATCAATCTGGTACTCTTTCACCTTCTGATATAACTCTTGCTCAAGCACCTCGCCCATCCTAG 1050 0.421 MASNGAMEPLIPQLPDPAAPRTNGQVGRRRFLRCKSAPLANLDPPEKTDIGSIQRSQSIFGKLHPSFRLVAIYLVGYLGIGAVIFYLVRHQISGKKTKGVLDAIYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFTGMALVGLILSKAADYLVEKQEVLLVKALHGNGPTQILKEVEVNKTRYKFYVVFFLLLVLIVTGTIFLVAVEKLDVIDAFYCVCSTITTLGYGDKSFSSEGGRVFAVFWILTGTICLGQLFLYIAELNTERRQKEVIEIVLNRRTTNADLEAADIDDDRTVGVAEFIIYKLKEMGKISQEDVSLVMKEFKELDFDQSGTLSPSDITLAQAPRPS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1474 349 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Lele25g1474 349 PRINTS Two pore domain K+ channel signature 109 137 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele25g1474 349 PRINTS Two pore domain K+ channel signature 223 232 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele25g1474 349 Gene3D - 169 290 - -
Lele25g1474 349 SUPERFAMILY EF-hand 284 341 IPR011992 -
Lele25g1474 349 Gene3D - 64 158 - -
Lele25g1474 349 ProSitePatterns EF-hand calcium-binding domain. 328 340 IPR018247 -
Lele25g1474 349 Pfam Ion channel 72 153 IPR013099 -
Lele25g1474 349 Pfam Ion channel 191 262 IPR013099 -
Lele25g1474 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 66 318 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele25g1474 349 FunFam Two-pore potassium channel 1 165 273 - -
Lele25g1474 349 MobiDBLite consensus disorder prediction 1 25 - -
Lele25g1474 349 SUPERFAMILY Voltage-gated potassium channels 63 159 - -
Lele25g1474 349 SUPERFAMILY Voltage-gated potassium channels 178 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1474 Lele-ChrLele25 11049547 11050993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1474 44 344 Ion Channels AT5G55630 63.816 2.93e-139 398