Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1469 ATGGGAAGCTTCACGGAGATGGAGATGCAGATGCAGGAGGAATTCATCTTCCGAAGTCCTCATTCCGGGATCGTCTCGGTGCCAGACAACGTGACGCTGCCGGAGTTTGTGCTTCACAACTCGGAGTTGTACGCTGACAAGGTGGCGTTCGTGGAGGTTGGGAGTGGCAAGGCGATAACACACGGCCAGGTGGCGAGGGACACAGAGAGGTTCGCAAAGGCGTTAAGATCTTTGGGTGTGAGGAAAGGGCATGTGGTGATTGCGGTGCTTCCCAATGTTGCTGAGTATGCGATTGTCGCGTTGGGGATTATGACGGCTGGCGCGGTATTTTCCGGCGCCAATCCGGCAGCTCATGCTACGGAAATCAAGAAGCAGGCTGAGTCTGCTGATGCTAAGCTGATGATCACAAATGGACTCAACTATGAAAAGGTGAAAGGTGTAGGCCTACCGGTGATAGTACTCGACGACGAGCCCATCGAAGACGCCATGAACTGGAAGAAGCTTCTAGAAGCAGCAGACCGAGCCGGCCAGACAGTTCCCAAAGAACCCCTCTCTCAAACCGATCTCTGTGCCATGCCTTTCTCCTCAGGAACCACCGGACTCTCAAAGGGCGTCATGCTAACTCACAGAAACCTCGTCGCCAACCTCTGCTCCACCCTCTTCGGCGTCGAACCGGAGATGATCGGTCAGGTCACCACCCTAGGGTTGCTCCCTTTCTTCCATATCTATGGCATCGCCGGAATCTGTTGCGCCACGCTCAAGAACAAAGGTACGGTGGTGGTCATGGGACGGTTCGAGCTTAGGACTTTTTTGAATGCTTTGATCACTCATGAGGTCAATTTCGCTCCCATCGTCCCTCCAATTATTCTGAACTTGGTTAAGAACCCTGTCGTGGATGAGTTTGATCTCTCCAAGCTCAAGCTTCAGGCCGTCCTCACCGCCGCCGCTCCTCTCGCTCCGGAAGTTCTCACGGCGTTTGAGAACAAGTTCCCCGGTGTTCTTGTCCAACAAGCGTATGGACTAACAGAACATAGTTGCATAACACTGACTCATGCACACAAAGGGTTAGCATATTCGAAAAGGAACTCAGTGGGCTTCATTCTCCCTAATATGGAAGTGAAGTTCATTGATCCTGACACAGGCAAGTCTCTGCCGAGGAACACGTCCGGCGAGCTCTGTGTGAGAAGCCAGGCCGTCATGCAAGGCTACTACAAGCAGATGGAAGAGACAGCACAGACAATTGATGAAGATGGGTGGCTTCACACCGGAGACATAGGGTTCATTGATGATGATGACAATGTCTTCATCGTGGATCGTATCAAAGAGTTGATTAAATATAAAGGCTTCCAAGTTGCTCCAGCTGAGCTAGAGGCCATTCTTCTATCTCATCCCGCTGTTGAAGATGCTGCCGTCGTGCCAATAGGAGATGAAGAAGCAGGGGAGATCCCAGGGGCAAGCGTGGTGATGAGCTCAGGAGCTAAAGAGAGTGAAGAAGACATAATCAAGTACGTTGCTTCTAACGTTGCAAGTTACAAGAAAGTGAGAGTTCTTCACTTTGTGGAGGCCATACCAAAGTCTCCTTCAGGCAAAATCATGAGGAGGCTTGTTAGAGACAGAATGCTCCAAAGCATGACTTCTTCTCAATCAAATAACTCTTAA 1659 0.5081 MGSFTEMEMQMQEEFIFRSPHSGIVSVPDNVTLPEFVLHNSELYADKVAFVEVGSGKAITHGQVARDTERFAKALRSLGVRKGHVVIAVLPNVAEYAIVALGIMTAGAVFSGANPAAHATEIKKQAESADAKLMITNGLNYEKVKGVGLPVIVLDDEPIEDAMNWKKLLEAADRAGQTVPKEPLSQTDLCAMPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVEPEMIGQVTTLGLLPFFHIYGIAGICCATLKNKGTVVVMGRFELRTFLNALITHEVNFAPIVPPIILNLVKNPVVDEFDLSKLKLQAVLTAAAPLAPEVLTAFENKFPGVLVQQAYGLTEHSCITLTHAHKGLAYSKRNSVGFILPNMEVKFIDPDTGKSLPRNTSGELCVRSQAVMQGYYKQMEETAQTIDEDGWLHTGDIGFIDDDDNVFIVDRIKELIKYKGFQVAPAELEAILLSHPAVEDAAVVPIGDEEAGEIPGASVVMSSGAKESEEDIIKYVASNVASYKKVRVLHFVEAIPKSPSGKIMRRLVRDRMLQSMTSSQSNNS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1469 552 CDD 4CL 27 534 - -
Lele25g1469 552 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Lele25g1469 552 Gene3D - 442 545 IPR045851 -
Lele25g1469 552 SUPERFAMILY Acetyl-CoA synthetase-like 26 542 - -
Lele25g1469 552 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Lele25g1469 552 Gene3D - 15 441 IPR042099 -
Lele25g1469 552 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Lele25g1469 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 538 - -
Lele25g1469 552 Pfam AMP-binding enzyme 41 446 IPR000873 -
Lele25g1469 552 FunFam Long-chain-fatty-acid--CoA ligase FadD 21 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1469 Lele-ChrLele25 10978723 10983089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1469 7 541 Monolignol Biosynthesis Gene Families AT1G62940 72.913 0.0 783