Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1453 ATGATGCCTTACATTATCATCTTAAATTCTCTGCTTTGCATAGCTTCTCAAAATGCATTGCCAACCAGAGCTGCCATTGCCACTGGTTCAGGTACTGATAGGCTTGCTTTGCTTGCTCTGAAGGAGAAGTTAACGAATGGTGTTCCAGAAGCTTTGCCTTCATGGAATGACTCTGTCCACTTCTGCAAGTGGCAAGGACACAATATGTTGACAGGAACTATTCCAGCTTCATTATCCAACATCTCTCAATTGCAATTTTTTGCAATACATGAAAATGCTTTTAGGGGCTTAGTCCCTACCTCTTTGGAAAGACTGCATAACCTTCGTAGATTTGTGATTCACACAAATAATTTTGGGGGTGAAGAAGGTCATGACCTAGATTTCCTCTCATCCTTAACAAATTGTAGTCAATTGCATGAAATAGAGATGCTAGGTAATAAATTTAGCGGTGTATTGCCACACTCAATTGGGAATCTCTCTGCCCAGCTTGATAGGCTTAGTATGGGATTCAATCATATCTTTGGTAATATACCTAATGAGATTGGTCAACTAGATGTCTTAACTTACCTTGATTTGGGACATAACTTCCTTCAAGGAACAATTCCACATTCGATTGGAAAGCTTGCAAATCTTGGAGAGCTACACCTATACGAAAATCAATTATCTGGTAGAATTCCTGATAATTTTGGAAATCTTACTAAGCTGTCTGTTCTTTCCTTGGATAATAACAATCTCAAGGGAACTATTCCAGTAAGCCTCAAACATTGCAAAGGTATGCAATTCTTGTACATAGATCAAAATAACTTGAGCCGTAATATACCAAAGCAAACTTTTGGTCACCTAGAAAGCTTAATACAACTTGACATGTCTTCCAATTCCTTGATTGGTCCCATCCCATCTGAGATTGGTAACATGAAGCATTTAGTGGAATTAAATCTCAGTAAAAACAATTTTTCTGGTGATATTCCAAAGGAACTTGAGGAATGCTTACAGTTGACAGATCTTGATATGAGTGGGAACTTTCTCCATGGAAGTATCCCCTCATCATTTAGTTCCTTGAAATCCCTCATCAACTTAGACTTTTCCAACAATAATCTGTCAGGCACCGTTCCACAAGAGCTAAAGGATCTTCCAATATTAGAGACTTTGAACTTGTCTCACAACCATTTTTATGGCATGGTTCCAAAAGGAGGAGTGTTTGATAATATCACAGCTATTTCCCTCCTAGGAAATGAGAATCTTTGCGGTGGAATACCTCAACTAAAGCTACCAATATGCCCAAATAAATCGAAGAAGCATTTCAAAGTCATAATCCTTATCATCATGATAGGCGGTTCTGTTACTTGTTTTGCAATTTGCCTGATCATTTGGAAGAGAAGAAAACATAAAAAGATCCATGACATGGTCGCACTCTTGGGAGACTTTGGATTAGCTAGGCTTCTCCATGAGGTTATAAGAAATTCTGGGGAGGGTCAAACTACATCCTCAGCAATTAAGGGAACTATTGGGTATATTCCTCCAGAGTATGGAGAAAGTGGCCAAGTTACAGCACAAGGGGATATCTACAGCTATGGGGTTGTTATGCTAGAGATGCTCACTGGAAAGAAGCCAACAGAGCGCATGTTTCGTGATGATCTAAGCCTACCCAAAGCAATGATAACTTGGAACAAAAAAGGTCTCAACAACTGGGCAGCGAAGCGGAGATTCCCAAAAACCAAGAGACATAAGCCTAATCGACAGCCAAGAGACAACATGGAAGAAGAGTCGCTGGAGATGCTATTGAAATCGATGAAGAGAAATGGGATTTTCATCCCATCGAGTGTATCGTCCGTTAGAGAACTCAGTCCTAGTAGTTTTGTCTCGATCTGCGCTCAGTGTCTGAACTCGATCGATGATTCGGCTTCAATTCCCATTTCTCTGCCTCCGGAACCCGAATCAGAGCGCGTCAGGATCTGTACGGATATCTCATCAGCGGTTAGGAATCTGGGTTACGCAGGAGATATCAGCTTCCACAAGTTCCTGGACCCATCTGAAGAGGACCTGTATAATTTGATAAGATTCATGGAAAAGAGGATTTCTGAGTGTTCTGGAATTGCGGACACTAAAATTATCAGCAAACTAGGAGAATATAACCTGAGAAGCTCTTTGGAAGGCTCAACTAAAAGGCCAGATGACAAAGGGGCAGCTTTTCATTCTTCTAATTCTGCAACCAATTTAAATGATTTTAGATTGGATATGCATGCACCTGAAACTCGGAGCAGTGAGGCTGACTTCTCTATCCACCTGGACGGCCAAACTTCCCATGAATCAAAAGAAATCAATGTAACTACAGCTGCTAATCCGTCCAGCTCCAGCACAGAAGATTTAAGCAAGGATGAACTGTCTTGTACATCAAACGAAAAGGATTTGAGCAAAGGACTAGTTAATTCTATGAGTGATCCAGTTGGAAATGAAGAAACTGATGCTCATATGGGCACTGATATGCCAGGGTTAAAACAAGAGACAAGAATTGAATCTGAGAAATTTCAAAGTCAAGACAAAGAAGTGATGGATGATCTGATTGCAATGACTTCAGAGCTAGAGCATCTTGAACAAGAATTGGATCTGACAACTGTAGCAGCTGAAATGGTATTGAATGGCCAACATTCTGTTGACTTATACCTTGACCAGCTCAATGAACGACTACAATCTAAAAGGAATTCCTTTTTGAAGTTAGAGTCAGAGTGGGACGCTGTTATAAAACATTTGGAAGAGAAAAAGAGAGGTCTCCAGGAGTCTATGTTTTCAGACATTCCAGAAGCACGGGAAATGCTCCAAAAGTTGAGGGAAGTTGAGCAGGAAGAGCAGTCCATTTTTTCTGAAATTAAAAAGCGAGACGAAGAATATTCAAAACTTTCTGCAGATCTTGGGAAGCAGCCTAAAGTGGCGTCTAGGAAATCCTATATTGAACGAATTAATGAGATCACAAAAAATAGTCGCAAGCAAGATGCTGATATTGAGCGGATCTTGAAAGAAACTAGGGAGGTTCAATTAGAGAGTAATTCTATCCAGGAACGCTTGCATCGAACGTATGCGGTTGCAGATGAAATTATCTTTAGGGAAGCAAAGAAAGACCCTATGGGGCGGCAAGTTTATAGGCTACTCACTAGCATCCATGGAACTTTTGAGCAGATATCTGAGAAAATTCTGGCAAGAGATAGAATTCAAAGACAAGTAGCTGAGTATGAAATGAAACTAGCAGCTATGGCTTCAAGAAATTTAGAAGCGGACAAAAACCATGCTGATCTTGATCCTAACCTGAGACAACCATTAGGATAA 3318 0.4033 MMPYIIILNSLLCIASQNALPTRAAIATGSGTDRLALLALKEKLTNGVPEALPSWNDSVHFCKWQGHNMLTGTIPASLSNISQLQFFAIHENAFRGLVPTSLERLHNLRRFVIHTNNFGGEEGHDLDFLSSLTNCSQLHEIEMLGNKFSGVLPHSIGNLSAQLDRLSMGFNHIFGNIPNEIGQLDVLTYLDLGHNFLQGTIPHSIGKLANLGELHLYENQLSGRIPDNFGNLTKLSVLSLDNNNLKGTIPVSLKHCKGMQFLYIDQNNLSRNIPKQTFGHLESLIQLDMSSNSLIGPIPSEIGNMKHLVELNLSKNNFSGDIPKELEECLQLTDLDMSGNFLHGSIPSSFSSLKSLINLDFSNNNLSGTVPQELKDLPILETLNLSHNHFYGMVPKGGVFDNITAISLLGNENLCGGIPQLKLPICPNKSKKHFKVIILIIMIGGSVTCFAICLIIWKRRKHKKIHDMVALLGDFGLARLLHEVIRNSGEGQTTSSAIKGTIGYIPPEYGESGQVTAQGDIYSYGVVMLEMLTGKKPTERMFRDDLSLPKAMITWNKKGLNNWAAKRRFPKTKRHKPNRQPRDNMEEESLEMLLKSMKRNGIFIPSSVSSVRELSPSSFVSICAQCLNSIDDSASIPISLPPEPESERVRICTDISSAVRNLGYAGDISFHKFLDPSEEDLYNLIRFMEKRISECSGIADTKIISKLGEYNLRSSLEGSTKRPDDKGAAFHSSNSATNLNDFRLDMHAPETRSSEADFSIHLDGQTSHESKEINVTTAANPSSSSTEDLSKDELSCTSNEKDLSKGLVNSMSDPVGNEETDAHMGTDMPGLKQETRIESEKFQSQDKEVMDDLIAMTSELEHLEQELDLTTVAAEMVLNGQHSVDLYLDQLNERLQSKRNSFLKLESEWDAVIKHLEEKKRGLQESMFSDIPEAREMLQKLREVEQEEQSIFSEIKKRDEEYSKLSADLGKQPKVASRKSYIERINEITKNSRKQDADIERILKETREVQLESNSIQERLHRTYAVADEIIFREAKKDPMGRQVYRLLTSIHGTFEQISEKILARDRIQRQVAEYEMKLAAMASRNLEADKNHADLDPNLRQPLG 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1453 1105 Pfam Leucine rich repeat 331 390 IPR001611 GO:0005515
Lele25g1453 1105 SUPERFAMILY L domain-like 162 416 - -
Lele25g1453 1105 Pfam Coiled-coil domain-containing protein 22 591 689 IPR008530 -
Lele25g1453 1105 Pfam Coiled-coil domain-containing protein 22 832 1081 IPR008530 -
Lele25g1453 1105 SMART LRR_typ_2 232 256 IPR003591 -
Lele25g1453 1105 SMART LRR_typ_2 305 329 IPR003591 -
Lele25g1453 1105 SMART LRR_typ_2 208 231 IPR003591 -
Lele25g1453 1105 SMART LRR_typ_2 353 376 IPR003591 -
Lele25g1453 1105 SMART LRR_typ_2 377 402 IPR003591 -
Lele25g1453 1105 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Lele25g1453 1105 Coils Coil 1065 1085 - -
Lele25g1453 1105 Pfam Leucine rich repeat N-terminal domain 32 66 IPR013210 -
Lele25g1453 1105 PANTHER OS04G0122200 PROTEIN 467 551 - -
Lele25g1453 1105 MobiDBLite consensus disorder prediction 764 829 - -
Lele25g1453 1105 MobiDBLite consensus disorder prediction 800 816 - -
Lele25g1453 1105 MobiDBLite consensus disorder prediction 769 792 - -
Lele25g1453 1105 FunFam LRR receptor-like serine/threonine-protein kinase EFR 124 432 - -
Lele25g1453 1105 Pfam Protein kinase domain 472 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1453 1105 Gene3D Ribonuclease Inhibitor 67 428 IPR032675 -
Lele25g1453 1105 SUPERFAMILY Protein kinase-like (PK-like) 466 548 IPR011009 -
Lele25g1453 1105 Coils Coil 888 908 - -
Lele25g1453 1105 Gene3D Transferase(Phosphotransferase) domain 1 455 631 - -
Lele25g1453 1105 ProSiteProfiles Protein kinase domain profile. 223 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1453 1105 SUPERFAMILY L domain-like 67 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1453 Lele-ChrLele25 10808461 10817091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1453 467 548 Receptor kinase-like Gene Family AT3G47570 47.561 4.33e-18 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele25g1453 DUF812 6.8e-44 No_clan