Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1452 ATGTTGCTCTCCATTATCATCAATCTTCTGCTCTGCATAGCCTTCCAAGCTACCTCGCCAACTAGAGCTGTTGCCATGGCCAGCGGGTCAAAGACAGATAGGCTTGCTTTGCTTGCTGTGAGGGATAAGTTAACCAATGGAAATCTAGAAGCTCTGAACTCATGGAATGATTCTGTCAACTTTTGAACTATTCCATCTTCGATATTCGACATCTCTCAATTGCAATTATTTGCAATATACGAAAATGCTTTTAGGGGCCTACTCCCTACTACCTCTTTGGGAAGATTGCAGAACCTTCGTCAATTTGAGATTGACGTAAATAATTTTGGGAGTGAAGGAGGTCATGACCTGGATTTTCTCCCATCATTAACAAATTGTAGTCAACTGAATTTAATAGAGATGCTAGATAATAAATTTAGCGGTGTATTGCCAAATTCAATTGGAAATCTCTCTTCCCAGCTTGATACGCTTAGCATGGGATTTAACCATATCTTTGGAAGCATACCTAATGAGATCAGCCGACTAGATGGCTTAACTTACCTTGGTTTGGGACATAACTTCCTTCAAGGCACAATTCCACATACGTTTGCAAGGCTTAGAAATCTTGGAATGCTATCCCTAGAACTAAATCAATTATCAGGGAGAATTCCTGATATCTTTGGAAATCTTACTAAGTTGATTGACCTTCGATTGTTTAATAACAATTTTGAGGGAACCATTCCAGTAAGCTTCAAACATTGCAAAGGTATGCAATTCTTCTACATAAACCAAAATAACTTGAGCGGTAATATACCAAGTCTAACTTTTGGTCATCTAGAAAGCTTAATACATCTTGACATGTCTTCCAATTCCTTGATCGGTCCCATTCCACCTGAGATTGGCACCATGAAGCAATTAGTGGAATTAAATTTGAGCGAAAACAACTTTTTTGGTGATATTCCAACAGAACTTGGGAAATGCTTACAGTTGACAGATCTTGATATGAGTGGGAACATCCTCCATGGAAGTATCCCCTTATCTTTTAGTTCCTTAAAATCCCTCATCAACTTAGACGTTTCCAACAATAACCTATCAGGCACAATCCCACAAGAACTAAAGGATCTCCCAATATTGGAGACTTTGAACCTGTCTCAGAACCATTTTTATGGTGAGGTTCCAAAAGGAGGAGTGTTTGATAATATCACAGCTATTTCACTCATAGGAAATGAGGATCTCTGCGGTGGAATACCTACACTGAAGTTACCTATATGCCCAAACTTTGGATTAGCTAAGCTTCTTCATGAGGTTACAAGCAATTCTACTGAGGGTCAAACTACATCCTCAGCAATTAAGGGAACTATTGGATATATTCCTCCAGAGTATGGAGAAAGTGGCCAAGTTACAACACAAGGGGATATCTACAGCTATGGGGTTCTTATGCTAGAGATGCTCACCGGAAAGAAGCCGACAGATAGCATGTTTCATGAGGATTTAAGCCTTCCCAAATTCTGCAAGTTAGCATTGCCAGACAGAGTCATTGATATAGTGGATTCAAGTTTGCTTGTTCTATCTGATAGAGATCAAAGGAAGACTATGCAAAATTCAGAGATGCAAGAAAATATTCAAGAGTCTCTAGTTAGCTTTGCTAGGATTGGAGTAGCATGTTGTCCAGAATTGCCAAGTGAACGAATGGGGATAAAAGATGTTTTAGCAAATTTGCTTGCAATTAAGCAAAAGTTATCGACATGTCTGAACAAGAGAGCTCTTAAGAATCATGGTTCTTATATTATATAG 1773 0.3886 MLLSIIINLLLCIAFQATSPTRAVAMASGSKTDRLALLAVRDKLTNGNLEALNSWNDSVNFXTIPSSIFDISQLQLFAIYENAFRGLLPTTSLGRLQNLRQFEIDVNNFGSEGGHDLDFLPSLTNCSQLNLIEMLDNKFSGVLPNSIGNLSSQLDTLSMGFNHIFGSIPNEISRLDGLTYLGLGHNFLQGTIPHTFARLRNLGMLSLELNQLSGRIPDIFGNLTKLIDLRLFNNNFEGTIPVSFKHCKGMQFFYINQNNLSGNIPSLTFGHLESLIHLDMSSNSLIGPIPPEIGTMKQLVELNLSENNFFGDIPTELGKCLQLTDLDMSGNILHGSIPLSFSSLKSLINLDVSNNNLSGTIPQELKDLPILETLNLSQNHFYGEVPKGGVFDNITAISLIGNEDLCGGIPTLKLPICPNFGLAKLLHEVTSNSTEGQTTSSAIKGTIGYIPPEYGESGQVTTQGDIYSYGVLMLEMLTGKKPTDSMFHEDLSLPKFCKLALPDRVIDIVDSSLLVLSDRDQRKTMQNSEMQENIQESLVSFARIGVACCPELPSERMGIKDVLANLLAIKQKLSTCLNKRALKNHGSYII 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1452 590 Pfam Leucine rich repeat 322 381 IPR001611 GO:0005515
Lele25g1452 590 Pfam Leucine rich repeat 153 212 IPR001611 GO:0005515
Lele25g1452 590 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 122 419 - -
Lele25g1452 590 Pfam Protein kinase domain 420 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1452 590 SUPERFAMILY L domain-like 153 407 - -
Lele25g1452 590 ProSiteProfiles Protein kinase domain profile. 196 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1452 590 PANTHER RECEPTOR-LIKE PROTEIN 55 419 570 - -
Lele25g1452 590 Gene3D Ribonuclease Inhibitor 36 415 IPR032675 -
Lele25g1452 590 SUPERFAMILY L domain-like 61 151 - -
Lele25g1452 590 Pfam Leucine Rich Repeat 274 293 IPR001611 GO:0005515
Lele25g1452 590 Gene3D Transferase(Phosphotransferase) domain 1 416 585 - -
Lele25g1452 590 SUPERFAMILY Protein kinase-like (PK-like) 419 572 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1452 Lele-ChrLele25 10781554 10784862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1452 64 573 Receptor kinase-like Gene Family AT3G47090 25.581 3.30e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele25g1452 Pkinase 9.3e-09 CL0016