Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1448 ATGAATTCAGGGTCCTTGATTTCCTTTGCATCTTCAAACTCTGCATCATCAAGAGAAGATCATAGAACGGCTAGTTCCAGAACCAGGCCTTCTCATAATTCAAGGCCTTCGTTTTTGATTCGGATGGTCATGAGAATATCAAGAGCAAGATGGTTCACTTTCTTAAGAAGAGTTTTCCATTACCAAAATGGATCAAGGTCTGATCTTGGCTCCAATCCTTTCAATTCAAGCACTTGGATGACACTAGAGTTGATTGCTCTGATGGTTCAGATAAGCCTTACAACCTTGGTTTTGGCTATTTCTAAGAAGGAGAGGCCTGTTTGGCCCATGAAGATTTGGATTTCTGGTTATGATATTGGCTGTCTGCTCAATCTGCTGCTGCTTTATGGCCGCTATCGTCAGCTTTATCTGTCTCATGGAGATGCGCTTAGCCTCTCTGATATGGAACAACAGAGAGGCAATGAAGAAACCAGGTGTTCACATTTGATGAACAGATGCCGGACTTCACTGGAGCTTTTCTTCGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGATCATTCCAAAGAGCCCCAAAACTGCACATGCTCTGCATCTCCTTGCTTGCTTGGAATGCCATAACCTACTCTTTCCCTTTCCTTCTCTTCCTCCTGCTCTGCTGCTGTGTGCCTCTGATCAGCAGCCTCCTCGGTTACAACATGAACATGGCCTCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCACAGCTTCCAAGTTGGAGATACAAGCTAGCTCATAACAAGTTGGACAACAATGGCCATGATTCTGCGGCCAGTGAAGGGCTGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAAGACAGAGAAGAAGTGAGGCAATTGCCATGTTCTCATACGTTTCACCAAAAATGTGTGGATCAATGGCTGAGAATCATATCTTGTTGCCCTCTATGTAAACAAGGATTACAGAGATAG 1005 0.4348 MNSGSLISFASSNSASSREDHRTASSRTRPSHNSRPSFLIRMVMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELIALMVQISLTTLVLAISKKERPVWPMKIWISGYDIGCLLNLLLLYGRYRQLYLSHGDALSLSDMEQQRGNEETRCSHLMNRCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHMLCISLLAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNMASSDKGASDDQISQLPSWRYKLAHNKLDNNGHDSAASEGLINEDPECCICLTKYKDREEVRQLPCSHTFHQKCVDQWLRIISCCPLCKQGLQR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1448 334 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 7 332 - -
Lele25g1448 334 MobiDBLite consensus disorder prediction 1 19 - -
Lele25g1448 334 ProSiteProfiles Zinc finger RING-type profile. 288 329 IPR001841 -
Lele25g1448 334 SMART ring_2 288 328 IPR001841 -
Lele25g1448 334 MobiDBLite consensus disorder prediction 1 33 - -
Lele25g1448 334 SUPERFAMILY RING/U-box 278 332 - -
Lele25g1448 334 CDD RING-H2_RNF111_like 286 329 - -
Lele25g1448 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 333 IPR013083 -
Lele25g1448 334 Pfam Ring finger domain 287 329 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1448 Lele-ChrLele25 10721264 10724313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1448 15 332 C3H Transcription Factor Family AT4G26580 70.000 1.03e-154 435