Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1432 ATGCTATACGTATGCTATATATACAGAAGCGTCACTGCGTCTCTTGTCTATCTTCATTTCAGGACTCTTCTGGTTCTATCTATAAGCAAATTGCATTTTGTTTTTGCTCTTCTCTTGCGTTCTGGTTCTGCACACCGCTTCTCTCTCTTCTCTCTTCTTGTTTTTCAATTCAATTCTGAAGTGATTTTCAGCCTAAAGGAAAAAAGCCACCCTTTTGTTCTTGTTCTGGTTGCGGTGGGAGCCAAAAGCATCGGGGACTTACTTGAAGGGTTGTCACTTGTCAAAATTTCATATAATCAGATAGCTCCAAGGAGACGGTTGTTTGGTGAAGTTGTTAGGAATGTGACGCCAAATGCTTTTGATAATGAGCAATTGCTTGGAGTTATGGACAAATTGAAGCATGGACAAGCTGTAGATATTCCAAATTATGACTTCAAGAGTTATAAAAGGGATGCAAATCCAGCTAGACGGGTAAACCCTTCTGATGTGATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACGGTTCAAAAGGGTCGGGATATTGGTGCTGTGCTTGATCAGTATTCAAAATTTGTAAAGCTAGCTTTTGATGACTTCATTCTTCCAACAAAGAAGTATGCAGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATATCCTAACCTTTATGTTATTCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAAATAAAAACGCATGATTTTGTATTTTATTCTGACCGTTTAATCCGTCTGGTTGTTGAACATGGCCTGGGGCATCTACCATTTACAGAAAAACAAGTAATCACTCCGACTGGGTCTGTGTACACTGGTGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCTGTTGTCAGGAGGTATCATGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGTATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGGGAAGGGGATAACAGCCAACAGCTGATATATGAAAAATTGCCTAATGATATCTCAGATAGGCACGTGTTACTGTTGGATCCCATCCTAGGCACAGGAAATTCTGCTGTTCAAGCAATTTCTTTACTTATAAAAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTAATATCGGCACCCCAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAAATAGTAACATCTGAGATCGAGTTGGGCCTGAATAAAGACTTCCGGGTCGTACCGGGCATGGGCGAGTTCGGGGACAGGTATTTTGGCACAGATGATGATCAGCAGGTGGTGGTCCCTTCACAGTAG 1485 0.4074 MLYVCYIYRSVTASLVYLHFRTLLVLSISKLHFVFALLLRSGSAHRFSLFSLLVFQFNSEVIFSLKEKSHPFVLVLVAVGAKSIGDLLEGLSLVKISYNQIAPRRRLFGEVVRNVTPNAFDNEQLLGVMDKLKHGQAVDIPNYDFKSYKRDANPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKGRDIGAVLDQYSKFVKLAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVVRRYHGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQVVVPSQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1432 494 FunFam Uridine kinase 100 263 - -
Lele25g1432 494 FunFam Uridine kinase 264 483 - -
Lele25g1432 494 Gene3D - 262 483 IPR029057 -
Lele25g1432 494 Pfam Phosphoribulokinase / Uridine kinase family 102 248 IPR006083 GO:0005524|GO:0016301
Lele25g1432 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 253 IPR027417 -
Lele25g1432 494 CDD PRTases_typeI 337 456 IPR000836 -
Lele25g1432 494 CDD UMPK 117 260 IPR000764 -
Lele25g1432 494 PANTHER URIDINE KINASE 99 393 - -
Lele25g1432 494 PRINTS Uridine kinase signature 135 150 - -
Lele25g1432 494 PRINTS Uridine kinase signature 206 217 - -
Lele25g1432 494 PRINTS Uridine kinase signature 228 241 - -
Lele25g1432 494 PRINTS Uridine kinase signature 192 202 - -
Lele25g1432 494 Pfam Uracil phosphoribosyltransferase 278 483 - -
Lele25g1432 494 Gene3D - 98 261 IPR027417 -
Lele25g1432 494 SUPERFAMILY PRTase-like 263 484 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1432 Lele-ChrLele25 10530172 10538425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1432 117 486 PRT Gene Family AT1G55810 86.486 0.0 651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1432 25 10530172 10538425 Lele01g1275 01 7758477 7761096 CCT
Lele25g1432 25 10530172 10538425 Lele02g1544 02 19487811 19489898 CCT
Lele25g1432 25 10530172 10538425 Lele03g1288 03 7732177 7734688 CCT
Lele25g1432 25 10530172 10538425 Lele04g1532 04 20337990 20339898 CCT
Lele25g1432 25 10530172 10538425 Lele27g0650 27 14436877 14445064 hybridization
Lele25g1432 25 10530172 10538425 Lele28g1446 28 10617288 10619549 hybridization