Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1428 ATGGGAGATTCAGCGTACAGGGTGGAAACAACCTCTCGTCTTGCTCAATGGAGAATCGACAACTCGGCTTCCTGCACTTACCACAAGTCTGATCCTTTCAAGATTGGCATGCATTTGGTTCTAGAAAAGAACCGGGGTATGTTCGTTAGGTTATACCCAGAAATGAACAATCTTTCCAGAGAAAAACCACCCATTGTATCTCTGATCTTAAGGGTTGTTAATTCTTCTGGAGATCGCAAGGCCTTGGCTCATTCGGAAATGAAAGACACACTGATCAAGCCCAATGAAGACTTCGTTTGGGCAATTGAGGTCCCACAAACTGGAAAATTCATTATTGACATTGAGTTCCTGGATTTAAAGACGGCAGCATCCTCCAAGGATGAACCATGCTCCATCTGGGATGATCAAATTATGCAGAAAACCTCAAATGCGTTGGCCCTTCAATCACTTGGTCGAATGCTAGCAGAACACATCCACACAGACATCACGATCAATGCTGCAGATGGAAGCATCCAGGCCCATTGTGCTGTTCTTGCCACTCGATCACCTGTCTTCAGCAGTATGTTCTCATATAATCTTAAGGAGAAAGAGTTATCTGCCATAGACATCTCAGACATGTCAGTTGAAGCTTGCCAAGCCTTTGTCAATTATCTTTATGGGAACATCAAGCATGAAGAATTTCTGGCACATCGGCTAGTCCTTCTGCATGCAGCTGATAAGTATGACATATCTGACCTGAAAGAGGCATGCCATCAGAGTCTTCTCAAAGATATTGATTCAAAAAATGTGCTTGAGAGACTCCAAAATGCATCTTTATATCAATTGCCAGAATTGAAGATGAGCTGCATGCAATATCTTGTGAAATTTGGTAAATTATATGACATTCGAGATGATTTCAAAGAATTCGTGCAATATGCAGACAGGGATCTGATTGCCGAAATCTTCAATGAAATCCTCACTTCCTGGAAAGGATTCTGA 978 0.4213 MGDSAYRVETTSRLAQWRIDNSASCTYHKSDPFKIGMHLVLEKNRGMFVRLYPEMNNLSREKPPIVSLILRVVNSSGDRKALAHSEMKDTLIKPNEDFVWAIEVPQTGKFIIDIEFLDLKTAASSKDEPCSIWDDQIMQKTSNALALQSLGRMLAEHIHTDITINAADGSIQAHCAVLATRSPVFSSMFSYNLKEKELSAIDISDMSVEACQAFVNYLYGNIKHEEFLAHRLVLLHAADKYDISDLKEACHQSLLKDIDSKNVLERLQNASLYQLPELKMSCMQYLVKFGKLYDIRDDFKEFVQYADRDLIAEIFNEILTSWKGF 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1428 325 SUPERFAMILY POZ domain 146 256 IPR011333 -
Lele25g1428 325 Pfam BTB/POZ domain 154 256 IPR000210 GO:0005515
Lele25g1428 325 CDD BTB_POZ_ZBTB_KLHL-like 159 241 - -
Lele25g1428 325 Gene3D Potassium Channel Kv1.1; Chain A 134 288 IPR011333 -
Lele25g1428 325 PANTHER OS08G0495500 PROTEIN-RELATED 5 324 IPR044714 -
Lele25g1428 325 SMART BTB_4 160 258 IPR000210 GO:0005515
Lele25g1428 325 ProSiteProfiles BTB domain profile. 160 219 IPR000210 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele25g1428 Lele-ChrLele25 10460431 10462251 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele25g1428 BTB 1.1e-18 CL0033