Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1420 ATGGCAGTCCAAAACGCCCTCCAAATAACTTCTTCTAGTGCTTATGATGATGATGGACATGCCAAAAGAACTGGAACTGTGTGGAGTGCAGTGTCTCATATCATTACTGCTGTGATTGGTTCTGGTGTTCTGTCTCTGGCTTGGAGCATTTCTCAGTTGGGTTGGATTGCAGGGCCTGTTTCCTTGCTTTTCTGTGCTACCGTCACTTATATTTCTTCCTTCCTCCTTTCTGATTGTTACAGAACTCTAGATCCTGTTTCTGGCAACAGAAACTACTCTTATAGTGATGCTGTTAGAACCTTTCTTGGTACTAACTCTCCTTGCTTTTGTTGGGCAATTCTAAAGTCAAAATGTTATCACAAGTATGGCCATCATGCTGCTTGTCACTATGGGGAAAACTCTTTCATGGTGCTGTTTGGAGTTGTACAGTTCTTTATGTCATTCATACCAGATCTTCATAATATGGCCTGGCTTTCGCTTGTTGCTGCAATTATGTCATTTTCATACTCTTTCATTGGACTTGGACTTGGCATTGCAAAAGTTATTGAAAATGGGACAATTAAAGGCAGCGTAACAGGAGTAGCAACTAGTAACTCTGTTGAAAAACTATGCTTGGTCTTTCAAGCAATTGGCGACGTTGCCTTTGCCTATCCATTCTCGATCATCCTTCTTGAAATACAAGATACATTGAAGTCTCCTCCACCTGAAAACCAGACCATGAAGAAGGCCTCCATGATATCAGTCCTTATCACAACCTTCTTCTACCTTTGTTGTGGATGCTTTGGATATGCAGCATTCAGAATCGACACGCCCGGAAACTTATTGACTGGCTTCGGCTTCTACGAGCCTTACTGGCTCGTGGACTTGGCTAATGCTTGCATTGTTGTTCATCTGGTGGGAGGATATCAGGGACTTGTCTTGTGA 924 0.4264 MAVQNALQITSSSAYDDDGHAKRTGTVWSAVSHIITAVIGSGVLSLAWSISQLGWIAGPVSLLFCATVTYISSFLLSDCYRTLDPVSGNRNYSYSDAVRTFLGTNSPCFCWAILKSKCYHKYGHHAACHYGENSFMVLFGVVQFFMSFIPDLHNMAWLSLVAAIMSFSYSFIGLGLGIAKVIENGTIKGSVTGVATSNSVEKLCLVFQAIGDVAFAYPFSIILLEIQDTLKSPPPENQTMKKASMISVLITTFFYLCCGCFGYAAFRIDTPGNLLTGFGFYEPYWLVDLANACIVVHLVGGYQGLVL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1420 307 PANTHER OS05G0424000 PROTEIN-RELATED 25 303 - -
Lele25g1420 307 Pfam Transmembrane amino acid transporter protein 23 303 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1420 Lele-ChrLele25 10307304 10310737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1420 8 303 Organic Solute Cotransporters AT1G77380 54.206 5.86e-122 356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1283 01 7814677 7815156 Lele25g1420 25 10307304 10310737 CCT
Lele02g1555 02 19562744 19563223 Lele25g1420 25 10307304 10310737 CCT
Lele03g1298 03 7809170 7810690 Lele25g1420 25 10307304 10310737 CCT
Lele04g1544 04 20414858 20415337 Lele25g1420 25 10307304 10310737 CCT
Lele25g1420 25 10307304 10310737 Lele27g0667 27 14636736 14650022 hybridization
Lele25g1420 25 10307304 10310737 Lele28g1433 28 10411931 10424195 hybridization