Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1413 ATGGCCACAAAAGGCAAAATCTTTCTGGTTATGGAGTATGTCAAAGTCCCACACCATGATTTGAAACCTGAGAATCATCTTCTGGACCAGAACGAAGATCTCAAGGTTTCTGATTTCGGCTTGTCGGTGTTGCCTCAGCAGCGTCATCCTATGGGATGTTCATCAGAACATGTGGAACTCCAGCTTATGCGTGTTGCTGGGGGTGCTGAAGAAGAAAATGAGAGAATCCATCGTCGTCCATGA 243 0.4609 MATKGKIFLVMEYVKVPHHDLKPENHLLDQNEDLKVSDFGLSVLPQQRHPMGCSSEHVELQLMRVAGGAEEENERIHRRP 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1413 80 ProSiteProfiles Protein kinase domain profile. 1 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1413 80 SUPERFAMILY Protein kinase-like (PK-like) 4 48 IPR011009 -
Lele25g1413 80 Gene3D Transferase(Phosphotransferase) domain 1 9 78 - -
Lele25g1413 80 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 46 - -
Lele25g1413 80 Pfam Protein kinase domain 15 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1413 Lele-ChrLele25 10168938 10169319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1413 1 47 CBL-interacting serine-threonine protein kinases AT5G25110 43.373 4.43e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele25g1413 Pkinase 4.4e-08 CL0016