Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1411 ATGGCAATGCTATTGAGGAAAATGTGGGAATCGGTATCGAACCGTTCGAATTCTGGTTCAAATTCCAACTCGCCTGAAAGCTTTCGTTGCGTTGATTCGCCTCTAGGAGTGTTCGAGCAAATTCCTTCCGATATATTGATCCAAATTTTCAGGCTTCTGGATCCCCAAAAAGCTGCGACATTGACCCTTGTGTGCAAAGCATGGAGATCGCTGGCCTCCGATAGCCGACTGTGGATTTATTTCCTTCAGAATTACCAATTGGAGCCATGGGAGACCATTTTTTTCGCCGAGACCAATTTGAGGTCCGGTCATCCTCTTCCAACCTTAGTCGGGCAGATGCCTCAGTTATCTTTCAAGCGTATATATGGCCTACGAGAACAAGTTCCTGCTGCTGTTATCATCGATGGTGGTTCTGGCTATTGCAAGTTTGGTTGGAGCAAATATGACCGCCCATCAGGGCGATCGGCTACCTTTTTGGAATTCGGTAACCTTGAGACTCCAATGTTCACTAGACTTAGACATTTTTTTGCAACTATTTATAGCAGGATGCAGGTTAAACCAAGTACTCAGCCAGTCATTGTTTCCATTCCAATATGCCATTATGACGATACTGAATCTGCCAAAGCATCAAGGCGGCAGCTTAAGGAGGCAATATGTGCTGCCCTCTTTGACATGAATGTTCCTGCTATTTGTGCCGTCAACCAGGCCACTTTGGCTCTGTATGCTGCAAAACAAGCTTCTGGAATAGCCGTTAATGTTGGTTTTCAGGTCACATCTATAGTTCCAATTCTGAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAAGTTGTGGGACTGGGAGCAATCAAACTCACAGGATTCCTTAGGGAGCTGATGCAACAGAACAACATGAATTTTGAATCTTTGTACACTGTTCGCACACTAAAAGAGAAGCTATGCTATGTTGCTATTGATTATGATGCTGAACTATCAAAAGATACACAAGCATCGTTTGAAGCAGCAGGAGAAGGACGGTTTACACTTTCAAAAGAGCGGTTTCAAACAGGAGAGATCTTGTTCCAGCCTCGTCTTGCTGGGTTGCAAGCAATGGGTTTGCACCAAGCTGTAGCCCTTTGTATGGACCATTGTCATTCTGCAGAATTAGCAGGCGACCCTGATTGGTTTAAGACTGTGGTTTTATCTGGGGGAACTGCATGTTTACCTGGTCTGGCAGAGAGGTTAGATAAGGAACTTCGTGACTTGTTACCTCCCCAGTTGTCCAGTGGAATCAAAGTCATGCCTCCTCCATATGGTGCTGATACTGCGTGGTTTGGAGCAAGGACTATTGGCAATTTGAGTACCTTTCCTGGGCCATGGTGTATAAAGAAGAAGCACTTCCACAAGTCTCGACTCAATCTCATATGGTGA 1407 0.4513 MAMLLRKMWESVSNRSNSGSNSNSPESFRCVDSPLGVFEQIPSDILIQIFRLLDPQKAATLTLVCKAWRSLASDSRLWIYFLQNYQLEPWETIFFAETNLRSGHPLPTLVGQMPQLSFKRIYGLREQVPAAVIIDGGSGYCKFGWSKYDRPSGRSATFLEFGNLETPMFTRLRHFFATIYSRMQVKPSTQPVIVSIPICHYDDTESAKASRRQLKEAICAALFDMNVPAICAVNQATLALYAAKQASGIAVNVGFQVTSIVPILNGKVMRKVGVEVVGLGAIKLTGFLRELMQQNNMNFESLYTVRTLKEKLCYVAIDYDAELSKDTQASFEAAGEGRFTLSKERFQTGEILFQPRLAGLQAMGLHQAVALCMDHCHSAELAGDPDWFKTVVLSGGTACLPGLAERLDKELRDLLPPQLSSGIKVMPPPYGADTAWFGARTIGNLSTFPGPWCIKKKHFHKSRLNLIW 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1411 468 Pfam F-box-like 39 78 IPR001810 GO:0005515
Lele25g1411 468 CDD NBD_sugar-kinase_HSP70_actin 132 276 - -
Lele25g1411 468 Gene3D - 33 104 - -
Lele25g1411 468 Gene3D - 172 459 - -
Lele25g1411 468 SUPERFAMILY F-box domain 34 95 IPR036047 GO:0005515
Lele25g1411 468 Gene3D Actin; Chain A, domain 4 279 362 - -
Lele25g1411 468 SMART fbox_2 41 81 IPR001810 GO:0005515
Lele25g1411 468 SUPERFAMILY Actin-like ATPase domain 246 457 IPR043129 -
Lele25g1411 468 SUPERFAMILY Actin-like ATPase domain 131 251 IPR043129 -
Lele25g1411 468 Gene3D - 236 434 - -
Lele25g1411 468 SMART actin_3 129 459 IPR004000 -
Lele25g1411 468 PANTHER ACTIN 173 460 IPR004000 -
Lele25g1411 468 ProSiteProfiles F-box domain profile. 35 81 IPR001810 GO:0005515
Lele25g1411 468 Pfam Actin 178 456 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1411 Lele-ChrLele25 10145171 10150968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1411 178 458 Cytoskeleton Gene Families AT3G12110 30.690 2.01e-38 142