Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1388 ATGGGTACATGTTTGAGTAAGAAGAAAGGGTCCTCGTCCTCGTCCTCCTCCTCCTCCTTTTCCCCTGTTGTTGAAAGCAAGTCTCTTTCTTCTTCAGCGCCTCCTGAGCTGAATAAGAATAATTCTGCCAATGTCATTTCTGTTTTCAAACCCAAATTGGAAACCGATCCACAACTGAATCTGGAGAAAGATAAGAAGAAAGGGCTTCCGGAGAAGCAAGAGCCAGTGCATGAAGATGAAGGAGGCCAAGTGAAAAAGGAGATTTTCATCATCAAGCACAGGAAAAGCCATGATGACAGGGAGAGAAATTCCAAATGCCCACCAACTGTTCACCAAAATGCCTCAGTTGATGGGGTTGCTGAAAATGAAGCTCCTAATAATGAAGCACCTGAGTTTATGGGTGCTAACAAGATGGCGCCACCAGCATCAACACCATCAGCAATGGGAATGGGTGTGGTGAGGACTTCAAGCTGCACCAAAGAAGAGGTGGATGCAATTCTCATACAGTGTGGGAGACTCAGCAGAAGCTCTTCCGGTAAAGCTGCTTCTTCTTCTGCTGGTGCGGGTGAACGTAGGAGAAGGTACTCTGGTTCAAAGAGAAGCTATGATTTTGATCACTGTGACAATGACACCATTTCTGCTGATGACGACCAAAGGAGAGCCAATAATGGTACTGACAATAGTAATCCGTGTGAAGATGATGGAGAGAAACGCCGCCAACACCGCCCACGAGACCGCCAATCTCCAAGGAAGCCATCTTCTTCTCATGGAAGGAGAAGGACCCCCAGCAGGGAAAGAGACCAGCAGCAGAACCAGCGATCCAGCAGCAGAGAGAGAAGGGTTAGCAGATCTCCTGGCAGAAGATCTTCAGATACCAGCAACCCCACAAGCTCAAACTCAGCTTCTGCCAATGCAGGTAACAACAACAGCAATCCCACTGCTAGACCTGGGAAGATGGTCTCTGTCCCTCCAACTGTTTCATCCTTGGTTATGGATAAGAGTAACAATGCTGGTGGAGGAGAATCTGGAGTCAAGAGGATCTCGGTGAAGAGGAATGTTGGTGGTGATAGTGGCATGGTGGCAGGTTCAAGATCTGCAGCGTCACCACGTTCTCAATCCCCTGCAAGAGCAAATGGAAATGGTGCTGCAGCAAATTCTAAAGCATTGGGAGAGAATAATCCTCAGCAACAACCCTCACTTAGCCGTAACTCTTCAAGGAAAGCAGAACAATCGCCTTATAGAAGAAACCCATTGAGTGAAATTGATCCCAACTCACTTGCTTATCCCCAATCAGCCAACAATAACAATAAGAAACTGAATGTTGATGTGAATGACAACACCAAAAGCAGAAGCAGAAGTGTGGGGAGAAATTGCAAGCCAAAGGAGCAACAGGAGGAGGAGGTGATAGGGCATTGTCCAGTGACTGAAAATATTGTTGTGAAAACAGTTGTGCCTTCAGGGATTGACAACCTTAAACAGTCCCAGACAACATTAACAAGAAGCAGGTCCTCTAGGCGATCCCGGGACCTAGACATCAACCCAGAAGCAATGTTGAATCCTGAACAGTCATACACTTCGCTACTACTTGAAGACATTCAAAACTTCCATCAAAAGAACACTGCTACATCCCCTGTCTCTCTCCCTGCTTGTGTAACTAAAGCTTCCTCTATACTTGAAGCTGTTGCTGACCTGAACTCCACTAACAGCTCAAATCTCCTCGTTCCCTTCTCCGATGACCAGAAAAGTCCACCCACGTGTCAATCAACTAAGAATGACTACAATGTCTCATTGGCTGCAAATCATTTTGGGAAGAGGGCGGTCACAGACACCAAAGGTCCGTTTGTAGAATCCGAGGTTGTTGTAAATGATGATGTGCTGGAGCCAAGCTTTCATAAGTATGTCACAGTGAAGAGGGGTGGTTCAGTTCGTAGTGGTGGCGGTAGTGGAGCTGACATGGAGGATCAAGAGTCTTCAGGAAGCAACAGTTTCACTGTGAGTGGTCAACAAAACTGGGGATTCTCATCTTCTTCATGGGAACCCAATTCTGCTGATTCTACAGATAGCTGGGCTTCAAGATTGAACTCAAGAGAGGAAGAAGTCCAGAAAAGTTTTTCAGGCTGGGCATCTGAAGCAGGACGTGACATGGAAGAAGCAAGGAGCAAGTCCAATGGCAAGAGGAGAGAATGTGATCATCAACACAGCAGTGGAATAGGGAGGGGCAGGCTTGCTGCAAATAAGAGTTTGCATACTGTATCTGTCACAGCGGCTGCAACCACATAG 2280 0.468 MGTCLSKKKGSSSSSSSSSFSPVVESKSLSSSAPPELNKNNSANVISVFKPKLETDPQLNLEKDKKKGLPEKQEPVHEDEGGQVKKEIFIIKHRKSHDDRERNSKCPPTVHQNASVDGVAENEAPNNEAPEFMGANKMAPPASTPSAMGMGVVRTSSCTKEEVDAILIQCGRLSRSSSGKAASSSAGAGERRRRYSGSKRSYDFDHCDNDTISADDDQRRANNGTDNSNPCEDDGEKRRQHRPRDRQSPRKPSSSHGRRRTPSRERDQQQNQRSSSRERRVSRSPGRRSSDTSNPTSSNSASANAGNNNSNPTARPGKMVSVPPTVSSLVMDKSNNAGGGESGVKRISVKRNVGGDSGMVAGSRSAASPRSQSPARANGNGAAANSKALGENNPQQQPSLSRNSSRKAEQSPYRRNPLSEIDPNSLAYPQSANNNNKKLNVDVNDNTKSRSRSVGRNCKPKEQQEEEVIGHCPVTENIVVKTVVPSGIDNLKQSQTTLTRSRSSRRSRDLDINPEAMLNPEQSYTSLLLEDIQNFHQKNTATSPVSLPACVTKASSILEAVADLNSTNSSNLLVPFSDDQKSPPTCQSTKNDYNVSLAANHFGKRAVTDTKGPFVESEVVVNDDVLEPSFHKYVTVKRGGSVRSGGGSGADMEDQESSGSNSFTVSGQQNWGFSSSSWEPNSADSTDSWASRLNSREEEVQKSFSGWASEAGRDMEEARSKSNGKRRECDHQHSSGIGRGRLAANKSLHTVSVTAAATT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1388 759 MobiDBLite consensus disorder prediction 638 759 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 287 316 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 173 465 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 56 106 - -
Lele25g1388 759 PANTHER OS02G0734667 PROTEIN 1 757 IPR040412 -
Lele25g1388 759 MobiDBLite consensus disorder prediction 1 148 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 712 735 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 651 690 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 1 48 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 364 412 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 423 453 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 230 286 - -
Lele25g1388 759 MobiDBLite consensus disorder prediction 192 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1388 Lele-ChrLele25 9937440 9939835 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1070 01 6249734 6257645 Lele25g1388 25 9937440 9939835 CCT
Lele02g1096 02 6939113 6940632 Lele25g1388 25 9937440 9939835 CCT
Lele03g1075 03 6244859 6253576 Lele25g1388 25 9937440 9939835 CCT
Lele04g1084 04 6805296 6806591 Lele25g1388 25 9937440 9939835 CCT
Lele25g1388 25 9937440 9939835 Lele25g1388 25 9937440 9939835 ECH
Lele25g1388 25 9937440 9939835 Lele27g0698 27 14980488 14982868 hybridization
Lele25g1388 25 9937440 9939835 Lele28g1397 28 10092933 10095297 hybridization