Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1375 ATGGGTGGCGCGTGCCTGCTGTTACATCATCCCCCAAGGAACGGTCATTATTTACATGAAGCAAAAGTGAAGCTTGACATGATGCTTTCAACATCAGGGTCGGTCCACCAGGAACATGAAGTGGAGAAGAAGTGTTTGAATTCGGAGCTGTGGCATGCATGTGCTGGACCCCTGGTATCCCTACCAACTGCGGGTACTCGTGTTGTTTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCGGCCACAACTAATAGGGAAGTTGATGGGCACATACCTAATTATCCAAGCTTGCTACCCCAGTTGATTTGCCAACTTCATAATGTCACAATGCACGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACTCTGCAGCCACTGACTCCGCAAGGGCAAAAGGAAACTTTTCTTCCTATGGAATTGGGAATAACAAGTAAGCTGCCCTCAAATTATTTTTGCAAGATATTAACAGCAAGTGACACTAGCACACATGGAGGCTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTCTTCCCTTCTCTGGATTACTCACAGCAACCGCCAGCACAAGAACTAATTGCCAGGGATCTCCATGATGTTGAGTGGAAGTTTCGTCATGTTTTTCGGGGACAGCCAAAACGTCACCTTCTTACAACAGGCTGGAGTGTATTTGTTAGTTCCAAGAGACTTGTGACTGGAGATTCTGTGCTGTTTATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATAAGCCGAGCCAATCGACCACAAACTTTGATTCCTTCATCAGTTCTATCAAATGATAGTATGCACATTGGATTGCTTGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACTGTCTTCTATAATCCAAGGGCTTGTCCATCTGAGTTCGTTATTCCTCTTTCAAAATATATCAAAGCTGTGTACCATACATGTGTTTCGGTTGGTTTGCGTTTCAGAATGCTATTTGAGACTGATGAGTCAAGTGTTCGCAGATACATGGGTACAATAACTGGTATAAGCGATCTGGATCCTGTTCGCTGGCCAAACTCTCACTGGCGATCAGTAAAGGTTGGTTGGGATGAATCAACAGCAGGAGAGACACAGCCAAGGGTTTCATTGTGGGAGGTTGAGCCTTTGACAACATTCCCAATGTATCCATTGCTATTTCCCCCCAGCTTTAAACGTCCATGCTATCCCAGCCCCTTATCTGTGAATGGTGGCAGAGATGATGCAACTAATGGGCTAATGTGGCGTAGTGGGGGAGCTGGAGAACATAATTTCAACTCCTTAAACTTTCAAAGTGGTGGTGTTTTCCCGTGGATGCAGCAGAGTTTGGATCCAGCTTTGTCAGGAAATAATTATAATCAGCACAACCAAGCATTGTTAGCAGCTGGTTTGCAGAACCCAGGGAACAGAGATCTACTGAGGCAACCAATGCTGCATTTTCAGCAGTCTTTTCCTTTTCTTCAACAATCTGGAAACCATAATCTTTCTTTGCAACTTCAGCAGAAGCAAGCAATTCAGCAATCCGTCTCATCCAATATTATGCAGCCACAAGCGCATGTATTGACAGAGAACCTGTCACAGAACCTTCTTCAGAAACCACTTAACATTAACAATCAGGAAGACCAAGCACACCAGCAGAATAATACTTGTCATGATTCACTCTCGATTCAAAATGATCAGTTCCATCAGAGGCAACACTCTAATGTGCCTTCACCATCATTTGCAAAACCAGATTTCTTAGATTCAAGCACGAAGTTCTCTTCATCAGTTTCCCCCATACAAAACGTACTTGGTTCACTGTGTCCTGAAGGGAGCAGTAGTGATATTTTAAACCTGTCCAGGCCCGGTCAGTCCATGGTGACTGAACAGATGCCCCAACAATCATGGACATCGAAGTATCCCCCTGTGCAGGTCAGTGCCTTTGGCAATTTGGTGTCACAAGCACAGTATAGTGGAAAAGATTCTGCACTGGCACCTCCACATTGTACGTCAGATGACCAAAATCCTACTCTCTTTTGTAATATCAATTCATCTGGCCTTGTGCTCCCAACTACTGTCCCGGGTTACACACCTTCATCGGTTGATGCTGATACGTCAACTATGCAAATAGGGAATTCTGGATTTCAGGGTCATCCATATGCTTGCATGCAGGATTCATCAGAATTATTGCAAAGTTCTGGGCAGGTTGACTCACAAAATCAAACCCAGACATTTGTCAAGGTTTACAAATCTGGCTTAGTTGGGCGCTCACTCGACATTTCCCGGTTCAGTTGCTATCATGAACTGAAAGAGGAGTTGGCTCAGATGTTTGGAATCGAGGGGAAAGACCCTCGTAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGACATGCTTCTCCTTGGCGACGATCCGTGGGAATCATTCGTCAATAATGTTTGGTACATCAAAATACTTTCACCTGAAGATATCCAGAAAATGGGAGACCAAGTGGCAGGACTGGAATCTTTAGGTCCTTACGCCGGATAG 2538 0.448 MGGACLLLHHPPRNGHYLHEAKVKLDMMLSTSGSVHQEHEVEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLLPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQGQKETFLPMELGITSKLPSNYFCKILTASDTSTHGGFSVPRRAAEKVFPSLDYSQQPPAQELIARDLHDVEWKFRHVFRGQPKRHLLTTGWSVFVSSKRLVTGDSVLFIWNEKNQLLLGISRANRPQTLIPSSVLSNDSMHIGLLAAAAHAAATNSCFTVFYNPRACPSEFVIPLSKYIKAVYHTCVSVGLRFRMLFETDESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGETQPRVSLWEVEPLTTFPMYPLLFPPSFKRPCYPSPLSVNGGRDDATNGLMWRSGGAGEHNFNSLNFQSGGVFPWMQQSLDPALSGNNYNQHNQALLAAGLQNPGNRDLLRQPMLHFQQSFPFLQQSGNHNLSLQLQQKQAIQQSVSSNIMQPQAHVLTENLSQNLLQKPLNINNQEDQAHQQNNTCHDSLSIQNDQFHQRQHSNVPSPSFAKPDFLDSSTKFSSSVSPIQNVLGSLCPEGSSSDILNLSRPGQSMVTEQMPQQSWTSKYPPVQVSAFGNLVSQAQYSGKDSALAPPHCTSDDQNPTLFCNINSSGLVLPTTVPGYTPSSVDADTSTMQIGNSGFQGHPYACMQDSSELLQSSGQVDSQNQTQTFVKVYKSGLVGRSLDISRFSCYHELKEELAQMFGIEGKDPRRSGWQLVFVDRENDMLLLGDDPWESFVNNVWYIKILSPEDIQKMGDQVAGLESLGPYAG 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1375 845 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Lele25g1375 845 ProSiteProfiles PB1 domain profile. 744 826 IPR000270 GO:0005515
Lele25g1375 845 CDD B3_DNA 152 245 IPR003340 GO:0003677
Lele25g1375 845 FunFam Auxin response factor 739 831 - -
Lele25g1375 845 Pfam Auxin response factor 279 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele25g1375 845 SMART B3_2 153 255 IPR003340 GO:0003677
Lele25g1375 845 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Lele25g1375 845 Gene3D - 739 831 - -
Lele25g1375 845 Gene3D - 151 254 IPR015300 -
Lele25g1375 845 FunFam Auxin response factor 317 389 - -
Lele25g1375 845 SUPERFAMILY DNA-binding pseudobarrel domain 137 282 IPR015300 -
Lele25g1375 845 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 42 831 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele25g1375 845 FunFam Auxin response factor 151 255 - -
Lele25g1375 845 SUPERFAMILY CAD & PB1 domains 735 816 - -
Lele25g1375 845 Gene3D - 317 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1375 Lele-ChrLele25 9816766 9824819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1375 123 842 B3 DNA Binding Superfamily AT5G37020 62.603 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele25g1375 B3 2.8e-19 CL0405