Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1373 ATGGAGTGCTTTGACTTCGCCGTCGATCACATCCGCAACTGCTCCGTCGGCGTCACCGGTGCCCGGATCATCTACGAAGGTTGCTTCCTCAGGTACGAGAGCAGTGGCTTCTTTGACCAGAACACAGACGCTGGCAACAACATCGTGTGTGGGAATAAACCAAGAAACTCTACAGAACTTGCTTCAACAGCGCAACAAGTTCTCAATAATCTGGAAATAGCAACACCAAGAATACCTAATTTCTATGCAGCCACTAAAACACAAGTGCCTAATACTAACACTTCAATTTATGCCATTGCTCAATGTCTCGAGACTCTCACTCAAAGTGGCTGCCAGGATTGCCTGAATACTGGCTTAAAAAATTTCCAGATATGTCTTCCCAACTCAAATGCTAAGACTTATGATGCTGGTTGTTTCATGAGATACTCCACCACTGCTTTCTTTGCTGATAATCAAACCACTAATATCAAGCACTTCTTGAAACAAGGAGGAGGTTCAACCAAGAAGAAGGCTATTATCGGAGGGGTCATCGGAGGTGTATCTGTTATTTTGATTCTTCTTGCATTATTTGCTTTGCATAGACGTTCACAGTTATCCAAGAGGAATCCTAGAGGTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCTGTTAACTATAGGTATAAAGATCTGAAGTCTGCAACAAAAAATTTCAGTAAAGAAAATAAACTAGGAGAAGGTGGTTTTGGAGATGTGTACAAGGGCACTTTAAAAAATGGAAAAGTAGTTGCTGTCAAGAAATTAGCATTGGGCCAATCCAAACAAATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATGTCCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGCACTAAGGGTCAAGAGAGATTCCTTGTTTATGAGTACATGGAAAACAACAATGTTGGCCAATTCTTATTTGGTAAAAATAAAGGTTCCCTCAGTTGGAAGCAACGTTATGGTGTAATTTTGGGCACAGCAAGGGGTTTGGCCTATCTACATGAGGAATTCCACGTTTGTATTATTCATAGAGATATAAAAACCAGCAACATCCTCTTGGATGATGATTTCCAACCTAAAATTGCTGATTTTGGACTAGCAAGGCTTTTGCCAAAGGACCAATCTCATCTCAACACAAAATTTGCAGGAACAATTTTTGATCCATTATACCATAAATATTATGTTTTTGTTAGGGGATACACAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAGGTTGATACCTATAGCTATGGTGTTGTACTTCTAGAAATCATTAGTGGACAAAAGAGTGGTGAATTGAAGAATGATGATTCAAGCGAACTCCTCCTTCAAAGAGCTTGGAAACTGTATGAGAGAGGAATGCACATAGAGTTTGTGGACAATACCTTAGATCCGAATGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACGCAAGCTTCTCCTGCAGCAAGGCCAACAATGTCTGAAATTGTTGTTATGCTCAAAACCAAGGGCTTAATGGAGCACAAGAAACCCACCATGCCTGTCTATGTTGATGCAAATTTGAGGCCTAGAACAAACAATTATACGTCTAATGGTACATCTTCACATGCTACTGTTTCCATTTCGAGTATATCAGGAAGATGA 1689 0.4014 MECFDFAVDHIRNCSVGVTGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGNKPRNSTELASTAQQVLNNLEIATPRIPNFYAATKTQVPNTNTSIYAIAQCLETLTQSGCQDCLNTGLKNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQTTNIKHFLKQGGGSTKKKAIIGGVIGGVSVILILLALFALHRRSQLSKRNPRGDILGATELKGPVNYRYKDLKSATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCTKGQERFLVYEYMENNNVGQFLFGKNKGSLSWKQRYGVILGTARGLAYLHEEFHVCIIHRDIKTSNILLDDDFQPKIADFGLARLLPKDQSHLNTKFAGTIFDPLYHKYYVFVRGYTAPEYAMHGQLSEKVDTYSYGVVLLEIISGQKSGELKNDDSSELLLQRAWKLYERGMHIEFVDNTLDPNEYDAEEVKKIIEIGLLCTQASPAARPTMSEIVVMLKTKGLMEHKKPTMPVYVDANLRPRTNNYTSNGTSSHATVSISSISGR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1373 562 ProSiteProfiles Protein kinase domain profile. 231 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1373 562 Gene3D - 46 147 IPR038408 -
Lele25g1373 562 Pfam Salt stress response/antifungal 56 144 IPR002902 -
Lele25g1373 562 ProSiteProfiles Gnk2-homologous domain profile. 1 37 IPR002902 -
Lele25g1373 562 CDD STKc_IRAK 237 516 - -
Lele25g1373 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Lele25g1373 562 FunFam Cysteine-rich receptor-like protein kinase 2 308 523 - -
Lele25g1373 562 FunFam Cysteine-rich receptor-like protein kinase 2 45 147 - -
Lele25g1373 562 SUPERFAMILY Protein kinase-like (PK-like) 212 515 IPR011009 -
Lele25g1373 562 SMART serkin_6 231 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1373 562 Pfam Protein kinase domain 231 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1373 562 ProSitePatterns Protein kinases ATP-binding region signature. 237 260 IPR017441 GO:0005524
Lele25g1373 562 Gene3D Transferase(Phosphotransferase) domain 1 308 531 - -
Lele25g1373 562 MobiDBLite consensus disorder prediction 542 562 - -
Lele25g1373 562 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 546 - -
Lele25g1373 562 ProSiteProfiles Gnk2-homologous domain profile. 42 147 IPR002902 -
Lele25g1373 562 FunFam Cysteine-rich receptor-like protein kinase 2 197 307 - -
Lele25g1373 562 Gene3D Phosphorylase Kinase; domain 1 197 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1373 Lele-ChrLele25 9806687 9811887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1373 20 562 Receptor kinase-like Gene Family AT1G70520 38.156 1.59e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele25g1373 Pkinase 3.3e-48 CL0016