Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1372 ATGCTTCAGCATTCTCATCTCCTTACCTTATTTACTTTCATATTTTGGTTATCCGGTGCTCTTAACGGTGTCCTTTCAGATCCACAGACTCATATTCTTACCATCGGCTGCACCCCATTCACCCAGTTCGTCGTTTCCGACTTGTCTGTCTTCAGTGACAACCTAAACGCAACATTTCGAGATGTCAGAGAACAAGTTAGAGACCAAAACAAGCAATTCGTCACGGTTCAGGAAGGTGGTGGAGGAAGCCCCGTATCCACTCTTTTTCAGTGCAGAAACTACCTTTCCATCGCCGATTGTCTAGCGTGCTTCGATGTAGCTGCCGTCATAGTCCGCAGCTGCCCTGCTGGAGCCCCCGGTGGCCACGTTGTCTACGACGGCTGCTTCCTCAGGTATGATGCAAGTCCTTTCTTTGACCGGGCGACGGATACTTTCAATGCTGCACTGTGTGGAAATAAAACTACAGAAGAAGCCACTGCATTTACCTCAGCTGTGCAAAAACTGCTCATGAATCTCCAAAAAGAAACACCAACAATCCCTGGTTTTGTCGCAGCCACAAAGACACAAGTGCCTAATAATGGTCCAACTATTTATGCCTTTGTTCAGTGTACAGAAACTATCTCACAAAGTGGATGCCTCAATTGCTTAAGTGTTGGATACAGAAATATGCAGACTTGTCTTCCCACTTCAGATGGTAGAGCTTTTGATCAGGGCTGTTTCATGAGATACTCCACAACTTCCTTCCTTCCTGATAACTACCAGATCATTCATGGCACTCCCATAATGGATAAACAAGGTTCAAGCAAAAAGGGGCCCATCATCGGTGGAGTTGTTGGAGGAGTATTACTGCTTGTTTTGGTTGCCCTTACACTTTTTGTTTGGACTAAACCATCCAAAAGCCCTAAAAGGGTTCTGGCTGGAGGAAACATAACTGGTGTAAGCGAGTTGAAAGGTGCAATTAATTACAGTTACATGGATTTGAAGTTTGCAACCAAAAATTTTCGTGTGGAAAATAAACTTGGAGAGGGAGGATTTGGTGCAGTGTATAAGGGAACTTTGAAGAACGGGAAAATAGTTGCAGTCAAAAAATTAACTTTACGCCAATCCAATAAAGTGGAGGAAGAATTTGAGAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTTGGATATTGCAGTAAAGGCAATGAGAGAATTCTTGTTTATGAGTACATGAAAAACACCAGCCTTGACAAATTCTTATTTGGTAAAATGAAAGGTTCTCTTAATTGGAAGCAACGACATGATATAATTTTAGGCACTGCAAGGGGTTTGGTATATTTACATGAGGAATTTCATATTCGTATCATACATAGAGATATAAAGTCTAATAACATCCTCTTGGATGATGATCTTCAGCCTAAAATTGCTGACTTTGGGTTAGCAAGACTCTTACCTGATGACAAATCTCATTTTAGCACGAAGTTTGCAGGAACATTAGGATATGCGGCTCCAGAGTATGCAATAAATGGCCAATTATCTGAGAAGGTTGATATATATAGCTATGGCATTGTAGTACTAGAAATTATCAGTGGTCAAAAAAGTGAAGAATTGAATGTGAATGGCGTAGATGAAGGTGAATTCCTCATTCAAAAGGCGTGGAAACTATATGAAAGAGGCATGCATCTAGAGTTGGTGGACAATACTTTAGACCCTAATGAGTATGATGAAGAAGAAGTAAAGAAAATCATAGAGGTCGGTTTGCTTTGCACTCAAGCGTCAGCCGCAATAAGACCGACAATGTCTGAAGTTGTTGTCTTGCTCCAAAACAAGGGTTTATTTAAAAACATGAGGCCAACTATGCCTTTCTTGGTGGAAACTAAATAA 1884 0.4108 MLQHSHLLTLFTFIFWLSGALNGVLSDPQTHILTIGCTPFTQFVVSDLSVFSDNLNATFRDVREQVRDQNKQFVTVQEGGGGSPVSTLFQCRNYLSIADCLACFDVAAVIVRSCPAGAPGGHVVYDGCFLRYDASPFFDRATDTFNAALCGNKTTEEATAFTSAVQKLLMNLQKETPTIPGFVAATKTQVPNNGPTIYAFVQCTETISQSGCLNCLSVGYRNMQTCLPTSDGRAFDQGCFMRYSTTSFLPDNYQIIHGTPIMDKQGSSKKGPIIGGVVGGVLLLVLVALTLFVWTKPSKSPKRVLAGGNITGVSELKGAINYSYMDLKFATKNFRVENKLGEGGFGAVYKGTLKNGKIVAVKKLTLRQSNKVEEEFESEVKLISNVHHRNLVRLLGYCSKGNERILVYEYMKNTSLDKFLFGKMKGSLNWKQRHDIILGTARGLVYLHEEFHIRIIHRDIKSNNILLDDDLQPKIADFGLARLLPDDKSHFSTKFAGTLGYAAPEYAINGQLSEKVDIYSYGIVVLEIISGQKSEELNVNGVDEGEFLIQKAWKLYERGMHLELVDNTLDPNEYDEEEVKKIIEVGLLCTQASAAIRPTMSEVVVLLQNKGLFKNMRPTMPFLVETK 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1372 627 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Lele25g1372 627 FunFam Cysteine-rich receptor-like protein kinase 2 411 615 - -
Lele25g1372 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Lele25g1372 627 FunFam Cysteine-rich receptor-like protein kinase 2 302 410 - -
Lele25g1372 627 Gene3D - 36 137 IPR038408 -
Lele25g1372 627 Gene3D - 142 248 IPR038408 -
Lele25g1372 627 SMART serkin_6 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1372 627 ProSiteProfiles Protein kinase domain profile. 334 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1372 627 Gene3D Transferase(Phosphotransferase) domain 1 411 616 - -
Lele25g1372 627 Pfam Salt stress response/antifungal 46 133 IPR002902 -
Lele25g1372 627 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Lele25g1372 627 Pfam Protein kinase domain 335 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1372 627 Gene3D Phosphorylase Kinase; domain 1 306 410 - -
Lele25g1372 627 CDD STKc_IRAK 340 609 - -
Lele25g1372 627 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 621 - -
Lele25g1372 627 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Lele25g1372 627 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Lele25g1372 627 SUPERFAMILY Protein kinase-like (PK-like) 318 607 IPR011009 -
Lele25g1372 627 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1372 Lele-ChrLele25 9761954 9778352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1372 6 625 Receptor kinase-like Gene Family AT1G70520 36.133 1.14e-124 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele25g1372 Pkinase 1.9e-51 CL0016