Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1371 ATGCTTCCCACCATAGGCAGGAGCATATTGAAGCCCCTGAATATTGAAATTGGAATTGGAAAATTGATTTGGTATACTTTGTGGTATGTTAAGACCATCGATATCACACCCTTGAAAAAACAAGGTTCAAGCAAAAAAGGGCACATTATTGGTGGGATTGTTGGAGGTGCAGTAGCTTTTCTTTTGATCCTCTTGGCATTATTTGCCTGGATCAGACGACCAAAAACAGTTAAGAGAGTTCCAAGAGGAGAGATAAGTGGAGCCAGCAAGTTAGACAGACCAGTTACTTATAGTTATAAGGATTTGAAGTTTGCAACCAAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGCTTTGGTGTTGTATATAAGGGTGCTCTAAAAAATGGGAAAGTAGTTGCTATCAAGAAATTAAATGCTCGCCAATTCACAAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAGCTGATAAGTAATGTTCATCATTTGAACCTTGTTCGACTTCTGGGATGTTGCAGTCAAGGGCACAAAAGAATTCTTGTTTATGAATACATGAAAAATAATAGTCTTGACAAGTTCTTATTTGGAACATTAGGATACACGGCACCTGAGTATATTCTTCATGGCCAATTATCGGAGAAAGCTGATATCTATAGTTATGGTGTTGTAGTCTTAGAAATCATCAGTGGTCGGCAAAGTCAAAAATTAACTATAGATAACATTGCTGAGGGTGAATTCCTCCTTCAAAAGGATGAGTTAAATATGAAGCCCACTATGCCTATCTTGGTTGAAACTAATTAA 804 0.3706 MLPTIGRSILKPLNIEIGIGKLIWYTLWYVKTIDITPLKKQGSSKKGHIIGGIVGGAVAFLLILLALFAWIRRPKTVKRVPRGEISGASKLDRPVTYSYKDLKFATKNFSEENKLGEGGFGVVYKGALKNGKVVAIKKLNARQFTKVEEEFESEVKLISNVHHLNLVRLLGCCSQGHKRILVYEYMKNNSLDKFLFGTLGYTAPEYILHGQLSEKADIYSYGVVVLEIISGRQSQKLTIDNIAEGEFLLQKDELNMKPTMPILVETN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1371 267 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 197 237 - -
Lele25g1371 267 ProSiteProfiles Protein kinase domain profile. 109 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1371 267 FunFam Cysteine-rich receptor-like protein kinase 2 76 185 - -
Lele25g1371 267 Pfam Protein tyrosine and serine/threonine kinase 200 236 IPR001245 GO:0004672|GO:0006468
Lele25g1371 267 Pfam Protein tyrosine and serine/threonine kinase 112 195 IPR001245 GO:0004672|GO:0006468
Lele25g1371 267 Gene3D Transferase(Phosphotransferase) domain 1 195 265 - -
Lele25g1371 267 Gene3D Phosphorylase Kinase; domain 1 83 185 - -
Lele25g1371 267 SUPERFAMILY Protein kinase-like (PK-like) 89 233 IPR011009 -
Lele25g1371 267 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1371 Lele-ChrLele25 9733932 9739948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1371 197 250 Receptor kinase-like Gene Family AT1G56120 49.091 1.94e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele25g1371 PK_Tyr_Ser-Thr 1.9e-18 CL0016