Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1369 ATGTTGTCTATGACGGATGCTTCCTCAGGTACGACATTAACCATTGATATCATCACACCCTCCTTCAAGCAAGGTTCAAGCAATAAGGGAACCATTATAGGTGGAATTGTTGGAAGCTTAGTAGCTCTTGTTTTGATCTTTCTTGTACTATTTGTCTGGTTTAGACGACGGTTAAAAAGGGCTAGGAGGGCTCCTAGAGGAGAAATAAGTGGAGCAAGCACATTGAAAGCCACAGCTATTTATGATTATAAGGACTTGAAGACCGCAACCTCGAATTTCAGTGCAGAAAATAAACTAGGAGAAGGAGGATTTGGTGTTGTATATAAGGGCACTTTGAAGAATGGAAAAGATATTGCAGTCAAGAAATTAACATTTCGCCACTTCACGAGGATGGAGGAGGATTTTGAAAATGAAGTGAAGCTTATTAGTAATGTTCATCATCGGAATCTTGTTCGACTCCTGGGATATTGTATTCATGACAAGAATAGAATTCTTGTTTATGAATACATGAAAAATAGCAGTCTTGACGTATTCTTATTCGGTAAAATGAAAGGCTCACTCAATTGGAAGCAACGATATGATATAATTTTAGGAACATTAGGATATACGGCACCTGAGTATTTAATTCATGGCCAATTATCAGAAAAGGCTGATGTCTATAGTTATGGTGTTGTAATCTTGGAGATTATCAGTAATCAAAAAAGTAAGGAACTAAGAGTATATGGTGATATTGAAGGCCAATTCCTACTTCAAAAGGCCTGGAAACTATATGAAAAGGGTATGCATGTGGAGCTAATAGACGATACCTTAGACCCTATTGATTATGATGTAGAAGAAGTGAAAAAAGTCATAGAGATTGGTTTGCTTTGCACCCAGGCATCTGCTGAAATAAGGCCAACAATGTCTGAAGTTGTTGTTTTGCTCCAAAATAAGGACTTGTTAGAGAATAAGATACCCACTATGCCTGTCTTGATTGAAACAAATTAA 987 0.3718 MLSMTDASSGTTLTIDIITPSFKQGSSNKGTIIGGIVGSLVALVLIFLVLFVWFRRRLKRARRAPRGEISGASTLKATAIYDYKDLKTATSNFSAENKLGEGGFGVVYKGTLKNGKDIAVKKLTFRHFTRMEEDFENEVKLISNVHHRNLVRLLGYCIHDKNRILVYEYMKNSSLDVFLFGKMKGSLNWKQRYDIILGTLGYTAPEYLIHGQLSEKADVYSYGVVILEIISNQKSKELRVYGDIEGQFLLQKAWKLYEKGMHVELIDDTLDPIDYDVEEVKKVIEIGLLCTQASAEIRPTMSEVVVLLQNKDLLENKIPTMPVLIETN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1369 328 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 199 - -
Lele25g1369 328 FunFam Cysteine-rich receptor-like protein kinase 2 58 169 - -
Lele25g1369 328 Gene3D Transferase(Phosphotransferase) domain 1 191 318 - -
Lele25g1369 328 Pfam Protein tyrosine and serine/threonine kinase 201 306 IPR001245 GO:0004672|GO:0006468
Lele25g1369 328 Pfam Protein tyrosine and serine/threonine kinase 95 196 IPR001245 GO:0004672|GO:0006468
Lele25g1369 328 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Lele25g1369 328 Gene3D Phosphorylase Kinase; domain 1 57 169 - -
Lele25g1369 328 SUPERFAMILY Protein kinase-like (PK-like) 82 319 IPR011009 -
Lele25g1369 328 ProSiteProfiles Protein kinase domain profile. 93 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1369 Lele-ChrLele25 9704143 9708818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1369 27 323 Receptor kinase-like Gene Family AT4G11490 32.493 1.32e-49 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele25g1369 PK_Tyr_Ser-Thr 1e-07 CL0016