Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1368 ATGGCCTCGGCTGGCCTTATTGTCTACGATGGTTGCTTCATCAGGTACAACTCCAATGGTTTCTTTGATGAGCCGCCGCAACCTTTCAATATCGTATCCTGTGGAAATCAGACAAGAAGAGAAGACACTACATTTAACACAACAGTGAGACAAGTGCTAATGAATCTCCAAACAGCAACACCTAGAATCCCTAGTTTCTCTGCGGCCACGAAGATTCTTGTTCCTAACAATAATGGTGTCACTATCTATGCTTATGCTCAATGTGTTGCTACTGTCACAATGAACAAGTGCCTTGATTGCTTGAAGGTTGACTACAGTAGCGTAGAGATTTGTCTTCCCTATTCGGATGGTACAGCTTTTGATCATAGTTGTTTCATGAGATACTCCACCACTGCCTTCTTTCCTGATAACCAGACCATTGATATCACATCCTTTAAAAAACAAGGCTCAAGCAATAAGGGGGCCACTATTGGAGAAGTAGTTGGTGGTATAGCTCTTGTTTTGCTTCTCCTTGGATTATTGTTTGCCTACTGGATTAGACGACCTAAAGAGAATGACAGTATTCCTAGAGAAGACATAATTGGAGCAAGCAAGTTGAAAGGACCAATTACTTACCGTTATAAAGATTTGATGGCTGCAACCAGCAATTATAGTGAAGAAAATAAACTAGGAGAAGGAGGATTCGGGGCTGTGTACAAGGGCACTTTGAAGAATGGGAAAGTTGTTGCTGTCAAGAAATTGACCTTAAATGACTCCACGAGTATAGAAGAAGATTTTGAAAGTGAAGTGAAGCTTATTAGTAATGTTCATCATCGAAATCTTGTTCAACTTCTGGGATATTGTTGTAAAGGCCATGACAGAATCCTTGTTTATGAATACATGAAAAACAGCAGCCTTGACAACTTCTTGTTTGGTAAAAGAAAAGATTTTCTCAACTGGAAGCAGCGATATGATGTAATTTTAGGAATCGCGAGAGGCTTGACATATTTACATGAGGAATTTCACGTTCGTATTATACATAGAGACATAAAGCCTAACAATATCCTCTTAGATGATGATATGCAGCCAAAAATTGCAGATTTTGGATTGGCAAGGCTCTTACCTAATGACAAATCTCATCTTTGCACAAAAATTGTTGGAACATGGGGATATACAGCACCAGAGTATGCAATTCATGGTCAATTATCAGAAAAAGTTGATATTTATAGTTATGGCGTTGTGATTTTAGAAATCATCAGTGGTCAAAAGTGCACCGAAGTAAAGCTTGATACTGATGAAGAAGGCGCATTCCTCATTCAAAAAGTGTGGAAACTTTATGAGAACGATAAACACTTGGAGTTAGTGGATAAGGCCTTGGATCCTAATGAGTATGATGCAGAAGAAGTGAAGAAAATCATAGAGATCGGTTTGTTTTGTATCCAAGCATCTGCCGGAGCAAGGCCAATGATGTCTGAAGTAGTTGCTTTGCTTCAAAACAAAGATTTACTGGAAAATTTGAGACCCACTATGCCCATCTTGATTGAAATTAATTAG 1533 0.3888 MASAGLIVYDGCFIRYNSNGFFDEPPQPFNIVSCGNQTRREDTTFNTTVRQVLMNLQTATPRIPSFSAATKILVPNNNGVTIYAYAQCVATVTMNKCLDCLKVDYSSVEICLPYSDGTAFDHSCFMRYSTTAFFPDNQTIDITSFKKQGSSNKGATIGEVVGGIALVLLLLGLLFAYWIRRPKENDSIPREDIIGASKLKGPITYRYKDLMAATSNYSEENKLGEGGFGAVYKGTLKNGKVVAVKKLTLNDSTSIEEDFESEVKLISNVHHRNLVQLLGYCCKGHDRILVYEYMKNSSLDNFLFGKRKDFLNWKQRYDVILGIARGLTYLHEEFHVRIIHRDIKPNNILLDDDMQPKIADFGLARLLPNDKSHLCTKIVGTWGYTAPEYAIHGQLSEKVDIYSYGVVILEIISGQKCTEVKLDTDEEGAFLIQKVWKLYENDKHLELVDKALDPNEYDAEEVKKIIEIGLFCIQASAGARPMMSEVVALLQNKDLLENLRPTMPILIEIN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1368 510 FunFam Cysteine-rich receptor-like protein kinase 2 29 133 - -
Lele25g1368 510 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Lele25g1368 510 CDD STKc_IRAK 223 492 - -
Lele25g1368 510 SMART serkin_6 217 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1368 510 FunFam Cysteine-rich receptor-like protein kinase 2 294 498 - -
Lele25g1368 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Lele25g1368 510 ProSitePatterns Protein kinases ATP-binding region signature. 223 246 IPR017441 GO:0005524
Lele25g1368 510 Pfam Protein kinase domain 217 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1368 510 SUPERFAMILY Protein kinase-like (PK-like) 200 490 IPR011009 -
Lele25g1368 510 ProSiteProfiles Protein kinase domain profile. 217 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1368 510 Gene3D Transferase(Phosphotransferase) domain 1 294 500 - -
Lele25g1368 510 FunFam Cysteine-rich receptor-like protein kinase 2 182 293 - -
Lele25g1368 510 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 507 - -
Lele25g1368 510 ProSiteProfiles Gnk2-homologous domain profile. 27 133 IPR002902 -
Lele25g1368 510 Gene3D - 28 133 IPR038408 -
Lele25g1368 510 Gene3D Phosphorylase Kinase; domain 1 185 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1368 Lele-ChrLele25 9654483 9659257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1368 3 508 Receptor kinase-like Gene Family AT1G70520 38.104 1.50e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele25g1368 Pkinase 1.1e-51 CL0016