Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1367 ATGGTGCCGGGGCGTGGAAGCGACTTTGTTCAAAGTAAACGGCAAGAAAAACAAAACTTTCATTGTCGTTTAATTTCCTGTTCTGAATGGCTGCTGGCTAGGATAAACTACCTCTCTATCAAAGATTGCGTTGCTTGCTTCGACTTCGCCGCCGTTCATATACGTAACTGCTCCGTCGGCGTCACCGGTGCCCGTATCATCTACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTGGTTTCTTCGATCAGAACACAGACGCTGGAAACAACATAATATGTGGGAATCAGACGATCAGAAACACCACAGGACTTGCTTCAAATGTGCAACAAGTTCTGACGGATCTGAACATAGCAACCCCCAGAATCAAAGGTTTCTATGCAGCTACTAAGACTCCATTGCCTAATAGTAATGGCTCCAGCCTTTACGCCATTGCTCAATGTATTGAGACTCTCACACAAGTTGGGTGCCAAGATTGCCTCAACATTGCGTTAAGAAATTTTCAGATTTGTCTTCCCAATTCAAATGCAAAGACTTATGATGCTGGTTGTTTCATGAGATACTCCAACAGAGCCTTCTTTGCTGATAATCAAACCATTAATATTAGGCCCTTCTTGGAACAAGGGGAAGGTTCAAGCAAGAAGAAGGCCATTATTGGGGGAGTGGTTGGATGTGTCTCTTTTCTTTTGATTCTCCTTGCATTATTTGCTTTGTACATACGATCAAAGTCGTCCAAGAGGATTCATAGAGGTGATATTTTAGGAGCAACTGAATTGAAAGGCCCAATGAATTATAGGTACAGCGATCTTAAGAAGGCCACGAAAAATTTCAGCAAAGAAAATAAGCTAGGAGAAGGAGGCTTCGGTGATGTATACAAGGGCACTCTAAAAAACGGAAAAGTAGTTGCTGTCAAGAAATTGGCTTTAGGCCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAACTGATTAGTAACGTTCATCATCGCAATCTTGTTCGGCTTCTTGGATGTTGCAGTAAAGGACAAGAGAGGCTACTTGTTTATGAATACATGAGAAACAACAGCGTTGGCACATTCTTGTTTGGCAAAAACAAAGGCACCCTCAATTGGAAGCAACGATATAATATTATTTTAGGCACGGCAAGGGGTTTGGCCTATTTGCATGAAGAATTTCATGTTTGTATCATACATAGAGATATAAAAAGCAGTAACATTCTCTTGGATGATGATTTAAAACCTAAAATTGCTGACTTTGGATTGGCAAGGCTTCTCCCACACGACTTATCTCATCTCAACACAAAATTTGCAGGAACAATGGGATATACGGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAGGCCGACACTTATAGTTTTGGTGTTGTAGTCCTAGAAATCATAAGTGGACATAAGAGTGGTGAATCAAAGGATGATACAGAAGGCGAATTCCTCCTTCAAAGAGCTTGGAAACTCTTTGATAGAGGCATGCATTTAGAGTTTGTGGACAAAACCTTAGACCCTAGTGAGTACGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGCTTTGCTTTGCACTCAAGCATCTCCTGCAGCGAGGCCAACAATGTCTGAAATTGTAATTATGCTCAAAGGCCAGGGTATAATGGAGAACAGGAGACCAACTATGCCAGTGTATGTGGATCCTAATTTCAATCCCAGAAGAGACTCTTCAACCTCTTATAATTCATCTTCCTCAAATGCCACTGCCTCCACTGTTGTTCTATCTGGAAGGTGA 1788 0.415 MVPGRGSDFVQSKRQEKQNFHCRLISCSEWLLARINYLSIKDCVACFDFAAVHIRNCSVGVTGARIIYEGCFLRYESSGFFDQNTDAGNNIICGNQTIRNTTGLASNVQQVLTDLNIATPRIKGFYAATKTPLPNSNGSSLYAIAQCIETLTQVGCQDCLNIALRNFQICLPNSNAKTYDAGCFMRYSNRAFFADNQTINIRPFLEQGEGSSKKKAIIGGVVGCVSFLLILLALFALYIRSKSSKRIHRGDILGATELKGPMNYRYSDLKKATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCSKGQERLLVYEYMRNNSVGTFLFGKNKGTLNWKQRYNIILGTARGLAYLHEEFHVCIIHRDIKSSNILLDDDLKPKIADFGLARLLPHDLSHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSFGVVVLEIISGHKSGESKDDTEGEFLLQRAWKLFDRGMHLEFVDKTLDPSEYDAEEVKKIIEIALLCTQASPAARPTMSEIVIMLKGQGIMENRRPTMPVYVDPNFNPRRDSSTSYNSSSSNATASTVVLSGR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1367 595 SMART serkin_6 276 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1367 595 Gene3D Transferase(Phosphotransferase) domain 1 353 559 - -
Lele25g1367 595 FunFam Cysteine-rich receptor-like protein kinase 2 353 555 - -
Lele25g1367 595 FunFam Cysteine-rich receptor-like protein kinase 2 88 192 - -
Lele25g1367 595 ProSiteProfiles Protein kinase domain profile. 276 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1367 595 ProSiteProfiles Gnk2-homologous domain profile. 1 80 IPR002902 -
Lele25g1367 595 SUPERFAMILY Protein kinase-like (PK-like) 260 578 IPR011009 -
Lele25g1367 595 MobiDBLite consensus disorder prediction 569 595 - -
Lele25g1367 595 ProSitePatterns Protein kinases ATP-binding region signature. 282 305 IPR017441 GO:0005524
Lele25g1367 595 Pfam Salt stress response/antifungal 97 189 IPR002902 -
Lele25g1367 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Lele25g1367 595 Pfam Protein tyrosine and serine/threonine kinase 278 545 IPR001245 GO:0004672|GO:0006468
Lele25g1367 595 ProSiteProfiles Gnk2-homologous domain profile. 86 192 IPR002902 -
Lele25g1367 595 CDD STKc_IRAK 282 549 - -
Lele25g1367 595 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 36 580 - -
Lele25g1367 595 Gene3D - 24 80 IPR038408 -
Lele25g1367 595 Gene3D - 88 192 IPR038408 -
Lele25g1367 595 Gene3D Phosphorylase Kinase; domain 1 240 352 - -
Lele25g1367 595 FunFam Cysteine-rich receptor-like protein kinase 2 241 352 - -
Lele25g1367 595 MobiDBLite consensus disorder prediction 563 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1367 Lele-ChrLele25 9619427 9625676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1367 38 572 Receptor kinase-like Gene Family AT1G70520 40.257 7.97e-123 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele25g1367 PK_Tyr_Ser-Thr 1.1e-50 CL0016