Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1360 ATGGATTCAGATCCTAACTTCTCTGTGAACGTTCGTTCTGTTGATGGGTTTCAAGGTGGTGAAGAAGATATCGTAATGATATCCACTCTCAGCTCTAATAAGAAGGGAAACTTGAGGTTCCTTTCTAATAGACACAGCAAATGTGGCTCTAGACATTGTCTTTGGCTATTGGGTAATGCAGAAACTCTAGAACAGAGCAGCTCAGTATGGAGAAAGATATTGAATGATGCTAAGCAAAGAGAGTGCTTCCATAATGCTGATGACCAGAACTTGGCTCAGGCCATTAAGGATGCCTTGCTTTTGCTTGAACTAGTGGATGAATCAAAGTCACAATTTAAATCACTCAGTATAACGGACAAGACAGAGAAGTCAAGAACTGATTCTTCCAAGTTCCAGAAAGAAGGTTGTAATACTGTAAGGTTACCCCAAGCCACCCCAGGTTGTACTAAGTCAACTCTATGTCGGGTCAGAGCCTTGGCTGGACCAGCCAAGTGGCTAAGTCACCAATTTCTAGGTCAGCCAGCCAACACAGCCGGCGGTTGA 543 0.4365 MDSDPNFSVNVRSVDGFQGGEEDIVMISTLSSNKKGNLRFLSNRHSKCGSRHCLWLLGNAETLEQSSSVWRKILNDAKQRECFHNADDQNLAQAIKDALLLLELVDESKSQFKSLSITDKTEKSRTDSSKFQKEGCNTVRLPQATPGCTKSTLCRVRALAGPAKWLSHQFLGQPANTAGG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1360 180 Pfam AAA domain 5 45 IPR041679 -
Lele25g1360 180 PANTHER DNA2/NAM7 HELICASE FAMILY 9 136 IPR045055 -
Lele25g1360 180 Gene3D - 1 99 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1360 Lele-ChrLele25 9429492 9430924 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1360 25 9429492 9430924 Lele01g1072 01 6265419 6268350 CCT
Lele25g1360 25 9429492 9430924 Lele02g1098 02 6945959 6948547 CCT
Lele25g1360 25 9429492 9430924 Lele03g1077 03 6258789 6263863 CCT
Lele25g1360 25 9429492 9430924 Lele04g1086 04 6811529 6814602 CCT
Lele25g1360 25 9429492 9430924 Lele27g0722 27 15375684 15380462 hybridization
Lele25g1360 25 9429492 9430924 Lele28g1353 28 9368017 9384497 hybridization