Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1349 ATGTTGTTCTCTCTTCCTTTCTCTCTCTCTGCCGCCTTTGGATCTTCTTCCTCTAAGGTAGGCGAAATACACACACACACACACACACACACTCATATGGCACCAGTTTCGTTTCCTCCAGGTTTCAGGTTCCACCCTACAGATGAAGAGCTGGTAGCTTACTATCTCAAAAGAAAGATTAATGGCCAAAAGATTGAGTTAGAAATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAATCGCTGTTACCAGGGAAGGACTTGGAGTGGTATTTCTTCAGTCCACGAGATAGGAAGTATCCGAATGGATCAAGAACGAACAGAGCGACGAGATGTGGTTATTGGAAGGCGACAGGGAAAGATAGGAAAGTGAATTCACAGGGTAGAGCAGTGGGGATGAAGAAAACCCTAGTTTACTATCGAGGAAGGGCCCCTCATGGTTCTCGTACTGGTTGGGTCATGCATGAGTATCGTCTTCACGAACGAGAATGTGATCCTGCTTCTACCGCCATGCAGGAGGCATATTCGCTGTGTCGTGTGTTCAAGAAGAGCGCAGTGATAAGCTCACCAAAGATAGAAGAGCAGTACGTGATGAGGAGCAATAGCCATGGGAATTACCATCATCATCATCAACAACAACAACATCACCAGATGGGTAGTGATCAGAACTCATCAACCATGAAAGAGCTTTACTCTGAAGGAAGAGGCGAAGACTTGGACAGCTCAAATAATTACTACATGCACCACCACCCCCACCTAAATAATGTCAATTCTTGTGGAGGAATCACTCAACAACATGCGAATAATCCTAGTTGGTCTCACTTCTTGTCTGATGATCCATTCTTAAGCCTCCCAACAACTTCTTCCTTCCCCAGTTATGGAGCCGCCATGTCCTATCCTCCGTCCAAGGTGGACATAGCTTTAGAATGTGCAAGGATGCAGAATAGGTTCAGTATGCCTCCATTGGAGGTGGAGGACTTCCCTCAAGTTGGGATTTCTGAACTGAAGATGCCACAACAACAACAACCACCTGATCATCATTCTGGTGCTATTCATGGAAGCAGAACTGAAACAGCAACAGATATTTTGCAGGAGATTCTATCAGTAGCTCATGCTTCTCAGGAACTCATTAATAATCAGACTTCAAACTATTTACCCACCACATGGGGCGGCTGCAACGAAAACTATGCTCCTCGTGAAGAAGATGACGATGACTTCACTTTCATGGTGGGAAGAGGAAGTGGTGATGATCAGAACTATGACTACAACCACCATGTGAGTGACTTGAGTTCCATGATCGGAGGCTTTAATAATGACACTACTACATGGGAAGATCATCAGAACACAATTAGGTCAATAGAGATTGCAGATCTGGATAATGAGTTCAAGGCACAGAGGATGGTCGAGAACTTGAGATGGGTTGGAATGTCGAGCAAAAATATGGACAAGAGCTTTATGGAAGATCAAAAGATTGTTCCTATTGAGGATATTACAAATTTCCCAATAAACAAGAAAGACAATGAGGTGCAAGAATCTGTGCAGCAGCAAAGCAACAATATCAATGACTTCTCATTGGGATTCATCAATTATGATGAACCAAATGAGAACTTCATAAATGAAGGCACCCCCATGGATGACTATTCAAGCTCTCCAAGCTGCTTTGAGGTTGTTGAGGAAGTAAAAGTTACCCATGGAATGTTTGTGGCAAGTCGCCAAGCAGCCGAAACATTCTTTCACCAGATAGTTCCTTCACAAACCATCAAGGTTCATCTCAACCCAGTAATGGCAACAAACAATAATCTTACAGAAGAAAATGCAGAAACAGTACAGACTACAGAAACACTGAGAATGGAGAACCAAGGGTCCTATTTCACAAAACTGAAAGACTACACGATGGGAAAGCTAATAATGAAGCCTTCAAAGATTTCTAGTGCTATTATGTTCATAGTTGCATTTCTCTTGATGCATTTTGCTTCATATTTGGGGGAGCATGAACAAATCTGGAAACTAGACCCTCAAAATGAAGATGTCGAGGAGAAATATTGCTCTAGTGCAAGTAGCAGCAAGAACAAACTGCCATGGAATGAGAAAGAAAGGGTTTGGTTCGTTGGTATCAAAAGTGGAAGAGGGTTTAGTGTGGTGTTGAAGAAGGTAGGGATCTTCCTTACAATTTCTTTGGCACTTTGCACCATGTGGGCTAACCACTTCACAGTTGATTGA 2238 0.4312 MLFSLPFSLSAAFGSSSSKVGEIHTHTHTHTHMAPVSFPPGFRFHPTDEELVAYYLKRKINGQKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATRCGYWKATGKDRKVNSQGRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLHERECDPASTAMQEAYSLCRVFKKSAVISSPKIEEQYVMRSNSHGNYHHHHQQQQHHQMGSDQNSSTMKELYSEGRGEDLDSSNNYYMHHHPHLNNVNSCGGITQQHANNPSWSHFLSDDPFLSLPTTSSFPSYGAAMSYPPSKVDIALECARMQNRFSMPPLEVEDFPQVGISELKMPQQQQPPDHHSGAIHGSRTETATDILQEILSVAHASQELINNQTSNYLPTTWGGCNENYAPREEDDDDFTFMVGRGSGDDQNYDYNHHVSDLSSMIGGFNNDTTTWEDHQNTIRSIEIADLDNEFKAQRMVENLRWVGMSSKNMDKSFMEDQKIVPIEDITNFPINKKDNEVQESVQQQSNNINDFSLGFINYDEPNENFINEGTPMDDYSSSPSCFEVVEEVKVTHGMFVASRQAAETFFHQIVPSQTIKVHLNPVMATNNNLTEENAETVQTTETLRMENQGSYFTKLKDYTMGKLIMKPSKISSAIMFIVAFLLMHFASYLGEHEQIWKLDPQNEDVEEKYCSSASSSKNKLPWNEKERVWFVGIKSGRGFSVVLKKVGIFLTISLALCTMWANHFTVD 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1349 745 Pfam No apical meristem (NAM) protein 39 165 IPR003441 GO:0003677|GO:0006355
Lele25g1349 745 MobiDBLite consensus disorder prediction 209 251 - -
Lele25g1349 745 ProSiteProfiles NAC domain profile. 38 189 IPR003441 GO:0003677|GO:0006355
Lele25g1349 745 Gene3D NAC domain 47 193 IPR036093 GO:0003677|GO:0006355
Lele25g1349 745 FunFam Nac domain-containing protein 86 47 192 - -
Lele25g1349 745 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 37 246 - -
Lele25g1349 745 MobiDBLite consensus disorder prediction 222 236 - -
Lele25g1349 745 SUPERFAMILY NAC domain 27 189 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1349 Lele-ChrLele25 9311636 9316977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1349 33 661 NAC Transcription Factor Family AT1G65910 43.932 2.48e-154 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele25g1349 NAM 1.6e-40 No_clan