Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1343 ATGAATTGTATCGGTATTATCCACAATGAGCTGTGGATTTGGTGCGTTGATCTGGGGTTCATCCTTTCCCTGGGTCATTGGAAGACAATCAAATCTTACGGCGAACTTAAAGAGTGTTTAGCAGAGTTTGACGAGTTGGTGGTTTCTGCAGCTATGGCCGTTCATGATCAAAATGGAGTTACCAGATCTCACGGCAGTATTCCAGTAGGAAACGGAGTATCTTTGAGCTCTGGACTTCATTCTGTTGCACGGGTCCATCTAAATGATCAGTTTTCTTGTGGGAATGACTATGCTCCAAAGGTAAGGAAACCATATACTAGCACAAAACAAAGAGAGAGATGGACAGATGAAGAGCACAAGAAGTTTCTTGAAGCTTTAAAGCTGTACGGCCGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACTACAGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTATAAGGTTCTTCGTGATCCTTGTGGAAACAATACGAACTCGATGGAGTCCATTGAAATTCCACCCCCACGTCCGAAACGAAAGCCTATGCATCCTTACCCTCGTAAGCTGGTGGAGCTCCCGAACAAAAAGACTTCCATACCAAAACAGCTAATGATGTCTAACTCTCTAAAATCATCAGATTTTGACCAAGAAAACCAATCTCCCAAGTCAGTATTAACTGCAGTTGGTTCGGACACCCTTGGTTCCTCTGATTCAGACACGCCAAATGGAAGCTCATCCCCAATTTCATCCAATAGTGCTGTTCATACCAACAGCTTTGTAGTTGCTGAACCTGAAAACCTACAATTGGAGGAGGAAGGGTGCCCACCATCGGCTGGACTAAATGCTGATCCTACTCTTGATAAGCAACCACTTATGAAGCATGATCTTCTCCAGAAAGAAAGCATATCTACCAAAGATGATGCTGCAGAAGAATCATCTGGTCGGATTCTGAAGCTTTTTGGGACGACTTTGTTGGTAACAGATAACTGCTGGCAATCCTCTCCAACAATGGAAGCATGCAAGTTGATTCACTCACAAGTTGTTCCATGTTGGGGTATTCCCCACATTAGATCACTGCACAAGAAGGTGCCGGAAGGAAAACGGCAACCAGACTCCAATGTTAGGGAAATTGAACATGTAGAAGTTAAAAATGAAGGATCTTTGACTAATCCAAGCACTAGGTCTTGTGTAAATAAGGATGAAAAATCAAATATGGAAGCCAAAAGGGAAACTAAAGCTATATTTGATCTGAAGAAGTGTGGAAAAGGGTTTGTACCATATAAGAGGTGTATTGCAGAGAGGGAAAACAACCAGGCCTCATCAGTAGCTAAAGTGGAGAGGGAAGAACAACGAATTCGCCTTTCCTTGTAA 1383 0.4281 MNCIGIIHNELWIWCVDLGFILSLGHWKTIKSYGELKECLAEFDELVVSAAMAVHDQNGVTRSHGSIPVGNGVSLSSGLHSVARVHLNDQFSCGNDYAPKVRKPYTSTKQRERWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTTVQIRSHAQKFFYKVLRDPCGNNTNSMESIEIPPPRPKRKPMHPYPRKLVELPNKKTSIPKQLMMSNSLKSSDFDQENQSPKSVLTAVGSDTLGSSDSDTPNGSSSPISSNSAVHTNSFVVAEPENLQLEEEGCPPSAGLNADPTLDKQPLMKHDLLQKESISTKDDAAEESSGRILKLFGTTLLVTDNCWQSSPTMEACKLIHSQVVPCWGIPHIRSLHKKVPEGKRQPDSNVREIEHVEVKNEGSLTNPSTRSCVNKDEKSNMEAKRETKAIFDLKKCGKGFVPYKRCIAERENNQASSVAKVEREEQRIRLSL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1343 460 Gene3D - 113 159 - -
Lele25g1343 460 ProSiteProfiles SANT domain profile. 109 160 IPR017884 -
Lele25g1343 460 MobiDBLite consensus disorder prediction 231 256 - -
Lele25g1343 460 MobiDBLite consensus disorder prediction 177 194 - -
Lele25g1343 460 SUPERFAMILY Homeodomain-like 105 158 IPR009057 -
Lele25g1343 460 ProSiteProfiles Myb-like domain profile. 106 156 IPR001005 -
Lele25g1343 460 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 109 158 IPR006447 GO:0003677
Lele25g1343 460 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 160 IPR017930 -
Lele25g1343 460 PANTHER SWI/SNF COMPLEX-RELATED 80 405 - -
Lele25g1343 460 SMART sant 110 158 IPR001005 -
Lele25g1343 460 CDD SANT 113 156 IPR001005 -
Lele25g1343 460 Pfam Myb-like DNA-binding domain 111 154 IPR001005 -
Lele25g1343 460 MobiDBLite consensus disorder prediction 167 206 - -
Lele25g1343 460 FunFam protein REVEILLE 6 isoform X1 113 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1343 Lele-ChrLele25 9257433 9261047 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele25g1343 Myb_DNA-binding 1.4e-13 CL0123