Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1339 ATGGTTCTCTCCAAAACCTCTTCTCAGACCGACGTCTCTGTGCACTCCACCTTCGCTTCTCGCTATGTCCGCGCTTCTCTTCCCAGGTTCAAGATGCCGGATGAGTCGATTCCTAAGGAGGCGGCGTTTCAGATCATAAACGACGAGCTCATGCTGGACGGAAATCCTAGGCTGAATCTGGCCTCCTTTGTCACCACTTGGATGGAGCCTGAGTGCGATAAGCTCATCATGGCCGCCATCAACAAGAACTACGTCGACATGGATGAGTACCCTGTTACCACCGAACTCCAGAATCGTTGCGTGAACATTATAGCTCATCTTTTCAATGCACCACTCGGAGATTCAGAGACAGCCGTCGGAGTCGGCACCGTCGGTTCATCAGAAGCCATAATGTTGGCGGGTTTGGCCTTCAAGAGAAAGTGGCAGAACAAAAGAAAGGCAGAGGGAAAGCCTTATGACAAACCCAACATTGTCACTGGAGCCAATGTTCAAGTTTGCTGGGAGAAATTCGCTAGGTACTTTGAAGTTGAACTCAAAGAAGTGAAACTGAGGGAAGGTTACTACGTAATGGACCCTGAGAAAGCAGTGGAAATGGTGGACGAGAACACCATCTGTGTTGCCGCAATACTGGGGTCAACACTGAACGGAGAATTCGAAGATGTGAAGCTGTTGAATGATCTGTTAGTGAAGAAGAACAGTGAAACAGGATGGGATACGCCAATTCATGTGGATGCAGCGAGTGGAGGGTTCATAGCACCATTCATATACCCAGAACTTGAGTGGGATTTCAGGTTGCCACTTGTGAAGAGCATCAATGTGAGTGGTCACAAGTATGGTTTGGTCTACGCCGGCATTGGTTGGGTCATCTGGAGAAGCAAGGAAGACTTGCCTGAGGAGCTCATCTTCCACATCAACTATCTCGGCGCAGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCAAGTCAAGTTATTGCTCAGTACTACCAGCTCATTCGCTTGGGTTATGAGGGATACAGGAACGTAATGGAAAACTGCAGAGACAACATGCTGGTGCTGAAAGATGGACTTGAGAAGACAGGGAGGTTCAACATCGTATCAAAGGACGACGGTGTCCCATTGGTGGCTTTCTCTCTCAAGGACAACCACCACTTTAACGAGTTCCAAGTTTCCGACCTCCTGAGGCGGTTTGGCTGGATCGTGCCGGCCTACACCATGCCTCCTGACGCTCAGCACATAACTGTGCTCCGTGTCGTCATCCGTGAGGACTTCTCCAGAACCCTCGCAGAGCGTCTCGTACTCGACGTCCAGAAGGTCCTGCACGAGCTCGAGTTACTACCTCCCAGGACGGTAGCCACCACCACCGTCACAGTGGCTGAGAATCACGAGGAGCAGGTCGTGACTAATGGCGGCGTCGTGGTGACTAAGAAGACTGAGTTGGAGACACAGAGGGAGATCACTGATGCTTGGAAGAAGTTCGTGTCCCTGAGGAAGAAGAACAACGAAAAGATGAGTGGTGTTTGCTAA 1530 0.5033 MVLSKTSSQTDVSVHSTFASRYVRASLPRFKMPDESIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVKKNSETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMLVLKDGLEKTGRFNIVSKDDGVPLVAFSLKDNHHFNEFQVSDLLRRFGWIVPAYTMPPDAQHITVLRVVIREDFSRTLAERLVLDVQKVLHELELLPPRTVATTTVTVAENHEEQVVTNGGVVVTKKTELETQREITDAWKKFVSLRKKNNEKMSGVC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1339 509 Gene3D - 66 360 IPR015421 GO:0003824
Lele25g1339 509 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Lele25g1339 509 FunFam Glutamate decarboxylase 66 360 - -
Lele25g1339 509 FunFam Glutamate decarboxylase 361 448 - -
Lele25g1339 509 PANTHER GLUTAMATE DECARBOXYLASE 1 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele25g1339 509 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele25g1339 509 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele25g1339 509 Gene3D - 1 65 - -
Lele25g1339 509 FunFam Glutamate decarboxylase 1 65 - -
Lele25g1339 509 Gene3D - 361 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1339 Lele-ChrLele25 9194866 9200551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1339 1 509 Calmodulin-binding Proteins AT5G17330 82.711 0.0 881