Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1331 ATGCCCTTGGAAGCAGGGATTTTCATTGAGCCACCACCTGCTTCTTCTTCTTCTTCGTCTCCTCCTGATCTTTCTCTTCACATAAGCCCTCCTTCAACCTCTTCTTCTTTGATTTGCAGCAACAACAACAACAACTATGAAGCTCGGCACTACAGTACTAATTCTTCTTCTTCTCTATCTGTCTCTCAATCTCTTCATGCCCACACCGAACTTTCTCTTGGAAGCAATTTCACTTGTGCAACCACACAAGAACCAGTGACCCATCACCTTAACAAAAACAGCAACACTAACCCTTATTTTCAGACCCACCACCACCACCACCAGAATCCGAATTTGAATAACTATGGAGTCTCATTGCTCGATGTGTCTCCTTCTGCATCCGACGGTTTGAGGCCCATCAAAGGGATTCCGGTCTATCATAACCGTTCCTTCCCTTTCTTGCCGGCGGTGGATCACAACCACAAGGATCATCATCATCATCATCAGCAGCAGCAGCAAACCAAGATGTGCTTCTACAATCCTTCTTTCCCTTCTCCTTCGGGCTCTCCGTACATGGCGGTGGCCGCCGCAGGGTTGGATCCCGTGTCGGCGTATAGGGCGGGTGCCACTGGCAGGTTTAATGGGATTTCCGGAGATGCTTTCAAATCTCATCATCATCATCAGTATGGGATGGTCGGGCCATCTTCACATGACGCGCCTGCAAGCAGTGGGCTAATGAGATCCAGATTCTTGCCTAAGCTTCCAACTAAACGCAGCATGAGAGCTCCCAGAATGCGGTGGACCACCACCCTTCACGCCCGTTTCGTTCACGCTGTCGAGCTTCTCGGCGGCCATGAAAGAGCAACTCCGAAATCAGTTCTAGAGCTGATGGATGTGAAGGATCTTACATTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCATCAGGCCATTCAGACGGGTCTGGAGAAGATGACATATTTGCAGATCAAAGAGGAAGCAGAACAGATAGGTCAGTGCAGCATGATATGGACTACTCTTCAACCACCACTACTCTTTGGAGCAATTCTTCAAGTAGTAGAGAGCCATGGCTTCAAAATGGTACCAAAGACATTGACGCTCTGAGACCACCTCCCTTCCAGACACCACCACTATCATCATCAGGCCATCAAATTCAGGAGTGTGATTCAAGGCATGTGAAGAACAACAACATAGCAAGCTCTAATTCGGAGTGCAAGAACCCAAGCTTGGATTTTACGTTAGGAAGACCAGATTGGAATGGCAATTGA 1302 0.4785 MPLEAGIFIEPPPASSSSSSPPDLSLHISPPSTSSSLICSNNNNNYEARHYSTNSSSSLSVSQSLHAHTELSLGSNFTCATTQEPVTHHLNKNSNTNPYFQTHHHHHQNPNLNNYGVSLLDVSPSASDGLRPIKGIPVYHNRSFPFLPAVDHNHKDHHHHHQQQQQTKMCFYNPSFPSPSGSPYMAVAAAGLDPVSAYRAGATGRFNGISGDAFKSHHHHQYGMVGPSSHDAPASSGLMRSRFLPKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDIFADQRGSRTDRSVQHDMDYSSTTTTLWSNSSSSREPWLQNGTKDIDALRPPPFQTPPLSSSGHQIQECDSRHVKNNNIASSNSECKNPSLDFTLGRPDWNGN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1331 433 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 22 432 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele25g1331 433 MobiDBLite consensus disorder prediction 347 370 - -
Lele25g1331 433 MobiDBLite consensus disorder prediction 19 41 - -
Lele25g1331 433 FunFam Myb family transcription factor 254 312 - -
Lele25g1331 433 SUPERFAMILY Homeodomain-like 253 309 IPR009057 -
Lele25g1331 433 MobiDBLite consensus disorder prediction 389 420 - -
Lele25g1331 433 Gene3D - 255 312 - -
Lele25g1331 433 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 256 309 IPR006447 GO:0003677
Lele25g1331 433 MobiDBLite consensus disorder prediction 327 346 - -
Lele25g1331 433 MobiDBLite consensus disorder prediction 1 41 - -
Lele25g1331 433 Pfam Myb-like DNA-binding domain 257 308 IPR001005 -
Lele25g1331 433 MobiDBLite consensus disorder prediction 311 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1331 Lele-ChrLele25 9103596 9107837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1331 1 430 G2-like Transcription Factor Family AT5G16560 42.952 4.22e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele25g1331 Myb_DNA-binding 2.2e-05 CL0123