Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1326 ATGAGGGAAAAAGCCCACTTAAAGTTCGAGCCTTTACTCATCTTCCTTTCTGGGTTATTTTCAGTCTTCGTCTTCGTTGGGTCTCAAGCAAACCCTAGCCAAGATGCTCCTGCAATGGAAGCTCTCAAGAAGAGCCTCAACATCCCTGAATCTATTGGATGGTCCGATTCGGACCCCTGCAAGTGGAACCACGTTGGCTGCGATGAAGGTCGGGTTACCCGGATCCAAATCGGACGTCTAGGTCTTCAAGGTACGCTTCCTCCGAGTCTTGGAGATCTCACTGAGTTACAGCGCTTGGAGCTTCAGTATAATAACATTTCGGGTCCTCTTCCTAGCTTAAAGGGGTTGGGTTCTTTGCAAGTGCTTCTTCTTAGTAACAACCAATTTAGTTCGATCCCTAGAGATTTTTTCACTGGCATGTCTCAACTTCAATCCGTGGAGATCGATAACAACCCATTTGAGAAATGGGAGATACCTGAAAGTCTTCGAGACGCTTCGTCTCTTCAGAACTTCTCTGCCAACTCGGCTAATATCACAGGCAAAGTACCCGATTTTCTTAATGCAGATGTGTTTCCTGGTTTGACCCTTTTGCATTTGTCCTTCAATAACCTCGAGGGTGGGTTTCCGGCGAGCTTTTCTGGTTTGCAGATTGAGACTTTGTGGGTTAATGGGCAGACAGGTAAACTTAATGGAACCATAGAATTTATGCAGAACATGACTTCCTTGAAGGAGGTTTGGTTGCATTCAAATGCATTACCAGGTCCATTACCAGATTTTTCAGGCTTGAAGAATTTGGAGGCCTTGAGTTTAAGGGATAATTCGTTTACTGGTCCTGTTCCTTTGTCATTGACGAGTCTTAAATCATTGAAAGTTGTAAATTTGACTAATAACCTACTTCAAGGGGCTGTGCCAGTATTCAATCCTGGGGTTCAAGTGGATATGACTAAGGATTCAAATGACTTTTGCTTGCCGACTCCCGGGGATTGCGATCCTCGGGTGAATATTCTTCTTTCCATTGTTAAACTTATGGGATATCCTCAAAGGTTTGCTAAGGAATGGAAGGGCAATGATCCTTGTAATTATTGGCTTGGGATTACCTGTAGTAATGGTAACATTACTGTTGTTAATTTTCAGAGGATGGGTTTATCTGGTACCATATCCCCAGAATTCGCCGCACTCAAATCACTGCAAAGAATAATGCTCGCTGATAACGCTCTCACCGGTACAATTCCAGGAGAGCTCGCTACACTTCCTATGCTTACTGAATTGGATCTCGCCAATAATCAGCTTTATGGAAAAGTCCCGTCTTTTAGGAGTAATGTAATCGTTAACACAAATGGTAACAAGGACATAGGCAAGGATAGAAGCAGTTCAACCTCTTCAGGTTCAGCATCTCCGAACCCTTCGGATCAAGGTGCAACAGGAGAAAATGGCGGGATTTCTGCGAATGGTGGCAAAAAATCTTCTCATGTGGTGGTGATCGTAATCGCTGTAGTTGGGGGTGTGTTTTTGGTTTCGATGATAGGTGTCATAGTTTTCTGCTTGTATAGAATGAAGCAAAAGCAGTTAAGCAGGGTACAGGGCCCGAATGCTCTGGTGATTCACCCTCGTCATTCTGGATCAGATAACGAAAGTTTGAAAATAACAGCTGCTGGCTCGAGTGTCAGTGTTGGCACGGCTAGTGAAACTCAAACAGTACCTGGCAGTGAGGCGGGGGGAGATATCCAAATGGTTGAAGCTGGAAACATGGTGATTTCCATTCAAGTTCTCCGGAACGTGACCAACAATTTCAGTGAAAAGAATATATTGGGACAAGGTGGTTTTGGAACGGTATACAAAGGCGAACTTCACGATGGTACCAAAATTGCAGTGAAAAGAATGGAGTCTGGAGCAATAACTGGAAAGGGTGCATCAGAATTTAAATCTGAAATTGCTGTTCTGACAAAAGTTCGCCACCGCCATCTTGTTGCACTTCTCGGCTATTGCTTGGATGGGAATGAAAAGCTTTTGGTGTATGAATACATGCCTCAGGGTACACTAAGTAGGCATCTGTTTAACTGGCCAGAAGAAGGATTACAGCCCTTGGACTGGAATAGGAGGTTGACCATTGCCTTAGATGTGGCTAGGGGTGTTGAGTACCTTCATGGCTTAGCCCATCAAAGCTTTATACACAGAGACTTAAAGCCCTCAAACATTCTTCTTGGAGATGATATGAGAGCTAAGGTCGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCAATAGAAACACGAATTGCTGGAACATTCGGATACTTGGCACCAGAATATGCAGTTACTGGCCGTGTGACAACTAAAGTAGATGTATACAGTTTTGGGGTGATACTGATGGAAATCATAACTGGAAGGAAAGCGCTCGATGAAACCCAACCCGAGGACAGCATGCACCTTGTAACATGGTTCCGCAGAATGTACATAAATGAAGAATTGTTTAGCAAGGCTATTGATCCCACGATCGATCACAACGAGGAAACTCTAGCAAGCATTCGCACGGTAGCAGAGCTAGCGGGCCACTGCTGTGCGCGGGAGCCATATCAAAGGCCGGACATGGGTCATGCTGTGAATGTTCTTTCCTCTTTGGCAGAACTCTGGAAGCCATCGGATCCGAGTTGTGAAGATATATATGGGATTGATCTTGACATGTCTTTGCCCCAAGCTCTTAAAAAATGGCAGGCTTATGAAGGTAGAGGTGGAGACTCTTCTTCTTCTTCTTCGCTTCTTCCAAGCTTGGACAACACGCAGACAAGCATCCCGACACGCCCATATGGTTTTGCCGAGTCTTTCACATCAGCAGATGGGAGGTGA 2853 0.4487 MREKAHLKFEPLLIFLSGLFSVFVFVGSQANPSQDAPAMEALKKSLNIPESIGWSDSDPCKWNHVGCDEGRVTRIQIGRLGLQGTLPPSLGDLTELQRLELQYNNISGPLPSLKGLGSLQVLLLSNNQFSSIPRDFFTGMSQLQSVEIDNNPFEKWEIPESLRDASSLQNFSANSANITGKVPDFLNADVFPGLTLLHLSFNNLEGGFPASFSGLQIETLWVNGQTGKLNGTIEFMQNMTSLKEVWLHSNALPGPLPDFSGLKNLEALSLRDNSFTGPVPLSLTSLKSLKVVNLTNNLLQGAVPVFNPGVQVDMTKDSNDFCLPTPGDCDPRVNILLSIVKLMGYPQRFAKEWKGNDPCNYWLGITCSNGNITVVNFQRMGLSGTISPEFAALKSLQRIMLADNALTGTIPGELATLPMLTELDLANNQLYGKVPSFRSNVIVNTNGNKDIGKDRSSSTSSGSASPNPSDQGATGENGGISANGGKKSSHVVVIVIAVVGGVFLVSMIGVIVFCLYRMKQKQLSRVQGPNALVIHPRHSGSDNESLKITAAGSSVSVGTASETQTVPGSEAGGDIQMVEAGNMVISIQVLRNVTNNFSEKNILGQGGFGTVYKGELHDGTKIAVKRMESGAITGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLQPLDWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIITGRKALDETQPEDSMHLVTWFRRMYINEELFSKAIDPTIDHNEETLASIRTVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPSDPSCEDIYGIDLDMSLPQALKKWQAYEGRGGDSSSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1326 950 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Lele25g1326 950 SUPERFAMILY Protein kinase-like (PK-like) 577 881 IPR011009 -
Lele25g1326 950 CDD STKc_IRAK 603 876 - -
Lele25g1326 950 SMART serkin_6 597 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1326 950 FunFam receptor protein kinase TMK1 675 892 - -
Lele25g1326 950 FunFam Receptor-like kinase TMK4 33 327 - -
Lele25g1326 950 PANTHER OSJNBA0070M12.3 PROTEIN 19 950 - -
Lele25g1326 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Lele25g1326 950 FunFam receptor protein kinase TMK1 558 674 - -
Lele25g1326 950 MobiDBLite consensus disorder prediction 910 950 - -
Lele25g1326 950 Pfam Leucine rich repeat N-terminal domain 33 68 IPR013210 -
Lele25g1326 950 Pfam Leucine rich repeat N-terminal domain 334 368 IPR013210 -
Lele25g1326 950 Gene3D Ribonuclease Inhibitor 331 455 IPR032675 -
Lele25g1326 950 SUPERFAMILY L domain-like 41 305 - -
Lele25g1326 950 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Lele25g1326 950 SUPERFAMILY L domain-like 334 440 - -
Lele25g1326 950 ProSiteProfiles Protein kinase domain profile. 597 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1326 950 SMART LRR_typ_2 191 214 IPR003591 -
Lele25g1326 950 SMART LRR_typ_2 116 139 IPR003591 -
Lele25g1326 950 SMART LRR_typ_2 417 439 IPR003591 -
Lele25g1326 950 SMART LRR_typ_2 93 115 IPR003591 -
Lele25g1326 950 SMART LRR_typ_2 286 308 IPR003591 -
Lele25g1326 950 Gene3D Transferase(Phosphotransferase) domain 1 675 886 - -
Lele25g1326 950 MobiDBLite consensus disorder prediction 912 939 - -
Lele25g1326 950 MobiDBLite consensus disorder prediction 446 482 - -
Lele25g1326 950 Gene3D Phosphorylase Kinase; domain 1 558 674 - -
Lele25g1326 950 Gene3D Ribonuclease Inhibitor 32 329 IPR032675 -
Lele25g1326 950 FunFam Leucine-rich repeat receptor-like kinase 331 454 - -
Lele25g1326 950 Pfam Protein kinase domain 598 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1326 950 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1326 Lele-ChrLele25 9058955 9062543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1326 84 879 Receptor kinase-like Gene Family AT5G07280 32.112 4.02e-89 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele25g1326 Pkinase 2e-46 CL0016