Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1320 ATGGATGCTCAATCCCGGAAAATGGCAATATTTCGTGCTAAATTGAATGCTCAGAAGAAGGAAAAGCGAATAGAATCCCCTCTTGTGAGGTATAATGAATTTGATCAACCAGTCTGCCGGGTTTGTGACGTTGCGCTGAAGCATGAATCTAATTGGGATGCACACCAAATTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTTAAAGCTAACGCGGCTGGATTGTCCCAGCAAAGTCATGCAAAGCCTGTTACAGATACCAAGTTGCCTAAGGCTAAACCTGAGCATGCTTCAGAATCACAATCTAAAATGCCCAATCATTCACTAGAATCGCTGAAACCTCCATCATCATCTGTGCTTCCACCAGATTTTTTTGATAACAGTGATGCTAGAAAGCCAAGATTGGAGAAGGACTCTGTCCAGTTGGAGGACCCTGATTCCAATGAAATGACAGGGATTTCTGCTCAGAGTCAAGCATTAAACTCAGAGAAGGTAAAAGGCGCTTTACACAGCAATAATGCAGCACAGCCAAAGGGAAGTCAGGATGCAATGGAGACTAGGCAGACATCGAGCACGCCTGCTGATACAGAAGCCAAAGAAGTAAAAGGGGTTCTTCCAGAAGGATTTTTTGACAACAAGGAGGCTGATTTGCGCGCTCGCGGCATAACTCCTGTTAAGCCTGATGTCAAGGACGAGTACAAGGAATTTGAAAAGTTGATTCAAGATGACTTGCAGGAGGTGGATGACCGGTTTGAAGAAGAAGAGATTGATGCTGCTGAAATGATTGAAGAAGCTGAAACTGTAGAGCAGAGGAACAACAGAGAGAGAGTGGAGAAGTTGAGGAAGAGGAGATTGGAGTTGAGGGCTTCTAAAGATGAAAAGCGTTGTAAAACTTCTGAGGCGGTAATGGAGTCTAAACATGATAATCCATCAGGTGACGATGACAGTGATGATAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 990 0.4394 MDAQSRKMAIFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVALKHESNWDAHQISRKHREAISNLKANAAGLSQQSHAKPVTDTKLPKAKPEHASESQSKMPNHSLESLKPPSSSVLPPDFFDNSDARKPRLEKDSVQLEDPDSNEMTGISAQSQALNSEKVKGALHSNNAAQPKGSQDAMETRQTSSTPADTEAKEVKGVLPEGFFDNKEADLRARGITPVKPDVKDEYKEFEKLIQDDLQEVDDRFEEEEIDAAEMIEEAETVEQRNNRERVEKLRKRRLELRASKDEKRCKTSEAVMESKHDNPSGDDDSDDNFAVDWRAQHL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1320 329 PANTHER UNCHARACTERIZED 1 329 IPR040050 GO:0003676|GO:0005681|GO:0008270
Lele25g1320 329 MobiDBLite consensus disorder prediction 291 329 - -
Lele25g1320 329 MobiDBLite consensus disorder prediction 101 115 - -
Lele25g1320 329 MobiDBLite consensus disorder prediction 145 196 - -
Lele25g1320 329 MobiDBLite consensus disorder prediction 86 100 - -
Lele25g1320 329 MobiDBLite consensus disorder prediction 73 207 - -
Lele25g1320 329 Coils Coil 58 78 - -
Lele25g1320 329 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Lele25g1320 329 Pfam Zinc-finger of C2H2 type 39 61 - -
Lele25g1320 329 MobiDBLite consensus disorder prediction 127 144 - -
Lele25g1320 329 Coils Coil 244 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1320 Lele-ChrLele25 9027101 9030542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1320 1 329 C2H2 Transcription Factor Family AT3G02860 47.181 2.82e-82 250