Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1310 ATGAAGTCTCTGCTTCCTCTTAACTTCTTGGTTCCTGCATTGTCGCTGTTTCTGTTCGCCATCGTAGGCGCAGATCTAGCTTCTGATAGAGCCGCTTTGGTGGCTCTGCGTAGTGCCGTTGGTGGCCGTTCCCTTCTTTGGAACCTGTCTCAGACGAGTCCTTGCTTATGGACGGGGGTGTTCTGTGAAAATTCTGCGAAGAACAGGGTTACTACGTTGCGGCTTCCTGGTATGGGTCTTTCTGGGAGACTTCCACTGGGAATTGGGAATCTCACCGAGCTTCAGACTCTGTCTCTTCGTTTTAACGCGCTCTCTGGGCCGATTCCTAGAGACTTTGCTAATCTTGTTAACCTTCGGAACCTTTATTTGCAGGGGAATTTCTTCTCTGGAGAAATCCCTGATTTCCTTTATCGTATGCAGAACTTGGTTCGTTTGAATTTAGCTATAAACAATTTCAGTGGTGAGATCTCGCCAAACTTTAACAACCTCACGAGGTTAGATACCCTCCTTTTGGAGAACAACCAGCTCACTGGGTCCATTCCTAACCTGTCTGCTCCTCCTCTTGATCAGTTTAATGTTTCGTCGAATCGGCTCAACGGGTCCATTCCCGCAAAGTTCTCGCACTTAGATGCGAGTGCATTTTCGGGGAATTTGTTTCTTTGCGGGAAGCCCTTGCAAGAATGCCCTGGAACGGCGGGTGGAAAGAAGAAGAAGTTATCGGGTGGAGCAATTGCCGGAATTGTAATTGGTTCAGTGGTCGGACTTCTGTTAATTTTACTTCTTCTGTTCTTCTTGTGCGGTAAAAGGAGAAGTAAAGACAAGAATCCGGATACAATACCGGGTAAGAGAGATGAGGTTGAAATTCCTCGAGAAAAGGCAACCAGATATATTGAGAATTCTGGAGCAAGTTATTCAGCAACAGCCAGAGGTGGTGGTGATGCTAAGACTGGTAGGAGTAAGAGATTGGTGTTTTTTGGTAATGTCAACAAAGTGTTTGATCTTGAGGATTTATTAAGGGCATCGGCAGAACTTATTCTTGATCTTGATGTTCCTGGTCAGCAAAATATTGTTTCTCAAGCTAATCATGGAGCTGGCAGAACCCCCCTAAACTGGGAAACAAGGTCTCGCATTGCCCTTGGTGCTGCACGTGGGATTGCATACCTACACTCACATAGCCCATCTGCCTCCCATGGAAATATTCAGTCATCAAACATTCTTCTCACCAGATCTTTTGAAGCTCGTGTTTCTGACTTTGGCCTTGCTCATCTTGCACTCCCAACTTCAACTCCCAACCGCATTTCCGGTTACCGAGCCCCAGAGGTAACAGATGCTCGCAAAATATCCCAAAAAGCAGATGTCTACAGCTTTGGTATAATGCTCTTGGAGCTGCTTACTGGGAAAGTTCCAACACATTCCTCGTTGAATGAAGAAGGGGTGGATCTCCCAAGATGGGTCCAATCTATTGTTCAAGAGGAGTGGAACACTGAGGTTTTTGACCTGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAGATGGTCAAGCTCTTGCAGCTTGCACTTGAATGTACCAAACAGTATCCTGACAATCGACCCTCAATGGATGCGGTGGCGAGCAGAATGGAGGAGATTTGTCGTGCCAGTTTAGAGAAAGAGGAAGAGAAGATTCAGTCATTGACGGATCCAGATAGTGGATATTCCCCACCTTGA 1707 0.464 MKSLLPLNFLVPALSLFLFAIVGADLASDRAALVALRSAVGGRSLLWNLSQTSPCLWTGVFCENSAKNRVTTLRLPGMGLSGRLPLGIGNLTELQTLSLRFNALSGPIPRDFANLVNLRNLYLQGNFFSGEIPDFLYRMQNLVRLNLAINNFSGEISPNFNNLTRLDTLLLENNQLTGSIPNLSAPPLDQFNVSSNRLNGSIPAKFSHLDASAFSGNLFLCGKPLQECPGTAGGKKKKLSGGAIAGIVIGSVVGLLLILLLLFFLCGKRRSKDKNPDTIPGKRDEVEIPREKATRYIENSGASYSATARGGGDAKTGRSKRLVFFGNVNKVFDLEDLLRASAELILDLDVPGQQNIVSQANHGAGRTPLNWETRSRIALGAARGIAYLHSHSPSASHGNIQSSNILLTRSFEARVSDFGLAHLALPTSTPNRISGYRAPEVTDARKISQKADVYSFGIMLLELLTGKVPTHSSLNEEGVDLPRWVQSIVQEEWNTEVFDLELLRYQNVEEEMVKLLQLALECTKQYPDNRPSMDAVASRMEEICRASLEKEEEKIQSLTDPDSGYSPP 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1310 568 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Lele25g1310 568 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lele25g1310 568 Gene3D Transferase(Phosphotransferase) domain 1 356 563 - -
Lele25g1310 568 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 354 554 - -
Lele25g1310 568 SUPERFAMILY Protein kinase-like (PK-like) 366 539 IPR011009 -
Lele25g1310 568 Gene3D Ribonuclease Inhibitor 185 232 IPR032675 -
Lele25g1310 568 PANTHER OS05G0588300 PROTEIN 13 345 - -
Lele25g1310 568 ProSiteProfiles Protein kinase domain profile. 233 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1310 568 Pfam Protein kinase domain 368 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1310 568 SUPERFAMILY L domain-like 47 226 - -
Lele25g1310 568 FunFam Probable inactive receptor kinase RLK902 26 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1310 Lele-ChrLele25 8892062 8894664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1310 25 543 Receptor kinase-like Gene Family AT1G48480 49.597 1.51e-180 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele25g1310 Pkinase 3.7e-21 CL0016