Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1306 ATGGGAAGACAACCTTGCTGTGACAAAGTTGGATTGAAGAAAGGCCCTTGGACTGCTGATGAGGACAAGAAACTCATCAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGAACTGTCCCTAAGCTTGCAGGGCTATTGAGATGTGGGAAAAGTTGCAGGCTGAGATGGACCAACTATCTCAGACCAGACCTGAAGAGGGGTCTTCTTTCTGAATATGAAGAGAAAATGGTGATTGATCTCCACGCCCAACTTGGCAACAGATGGTCTAAGATTGCGTCTCATCTTCCCGGAAGAACTGATAATGAGATCAAGAACCACTGGAACACACACATCAAGAAGAAGCTCAAGAAAATGGGGATTGATCCTGTCACTCACAAGCCCCTAAGCCAGAATCCGACACCATCACAGGCACAGATTAATCAACTTCAGATACAACAACAGCGACCTGTAACAACTAGCCTCAAGATTGATCAAAATAATGGAGAGTCAGAGACAGAGAAGGTAGACGCCTCGTATGAGTCATCATCAACCTTAACTGAATCGAAAGAGGAGGATCATCACAAGATTGATGATGAAACTCCCCCATTTGACGACATCATCAACAGTTTCTGCACTGACGAGGTCCCATTGATTGAACCTGATGAGATTCTAATGCCCTCCTCTGGTCCTACCCCTTCGTCTTCTTCATCTTCTTCTTCTACTTCTACTTCAAATTCTTCCAACTTCCTCGGGGAGCTGGAGCTCCCGGAATTCGAGTGGGCTTGTAATTACAGTGACGATAACAACACCGATAACAACAGTATGGGATTGTGGGATGGTGGTGATTTTATGAGCGTCTGGGATTTGCTTTTGAATGATGATGATGACAGGAAGATGGTAGATTTTGATTCTGCTCGGAAACAATGTCCAAGAATGGTCACGGGTCAAGAATCTTGGGCATATGGGTTGTTTTGA 957 0.4493 MGRQPCCDKVGLKKGPWTADEDKKLINFILTNGQCCWRTVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSQNPTPSQAQINQLQIQQQRPVTTSLKIDQNNGESETEKVDASYESSSTLTESKEEDHHKIDDETPPFDDIINSFCTDEVPLIEPDEILMPSSGPTPSSSSSSSSTSTSNSSNFLGELELPEFEWACNYSDDNNTDNNSMGLWDGGDFMSVWDLLLNDDDDRKMVDFDSARKQCPRMVTGQESWAYGLF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1306 318 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 235 - -
Lele25g1306 318 MobiDBLite consensus disorder prediction 221 242 - -
Lele25g1306 318 MobiDBLite consensus disorder prediction 123 202 - -
Lele25g1306 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele25g1306 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele25g1306 318 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Lele25g1306 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele25g1306 318 MobiDBLite consensus disorder prediction 127 160 - -
Lele25g1306 318 FunFam MYB transcription factor 11 67 - -
Lele25g1306 318 MobiDBLite consensus disorder prediction 216 242 - -
Lele25g1306 318 FunFam MYB-related transcription factor 70 130 - -
Lele25g1306 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele25g1306 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele25g1306 318 CDD SANT 74 112 IPR001005 -
Lele25g1306 318 MobiDBLite consensus disorder prediction 179 196 - -
Lele25g1306 318 CDD SANT 16 61 IPR001005 -
Lele25g1306 318 Gene3D - 70 146 - -
Lele25g1306 318 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele25g1306 318 Gene3D - 11 67 - -
Lele25g1306 318 SMART sant 66 114 IPR001005 -
Lele25g1306 318 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1306 Lele-ChrLele25 8846662 8847937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1306 1 288 MYB Transcription Factor Family AT1G66230 57.912 4.72e-100 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g1306 Myb_DNA-binding 5.5e-12 CL0123