Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1302 ATGTGTTCTGTTTGCCCTTGCCAGTCTATTCGCAGAACCAGGCGTTTTCCGTGGCAGCATGATTTATTTGAAGATAGCCTAAAAGCTGCAGGGATACAAGGAATCGAAGTAGGCACAAAGTTTGGTGCAAAGTATAATGGTCTTTTGGGTTCTGCTGAAGTTGTCTATACTAGAAGGAGTGATGCATTTGCAGCTCTTAAACGATACAATAATGTACTTTTGGATGGAAAGCCCATGAAGATTGAGGTTGTTGGTGCCAATGCAGAATTTCCTTTATCAGCTCGTGTTAATGTTTCTGGGATAAAAGGGCAGAGGAAGAGGACAGTTGTCATGACGCCTGGAGGTCGAGGAGGTAGAGCTAGAGGTCCTGCTATGTTTAATCGTGGTGCAGGTTGGGGACGGCGTGGGGCTGGAAGGAGTGGTAATGGGAGTATGCGTGGTGGAGGCAGTGGACGAGCTAGGGGCAGGGGCAGGGGCCGGGGTCGAGGTCGGGGGCGTGGGAAGAAGGATGCGGGTGACAAGTCTGCAGAGGATCTTGACAAGGAACTGGAGACTTATCATGCTGAGGCCATGCACATCTCATGA 585 0.4991 MCSVCPCQSIRRTRRFPWQHDLFEDSLKAAGIQGIEVGTKFGAKYNGLLGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEVVGANAEFPLSARVNVSGIKGQRKRTVVMTPGGRGGRARGPAMFNRGAGWGRRGAGRSGNGSMRGGGSGRARGRGRGRGRGRGRGKKDAGDKSAEDLDKELETYHAEAMHIS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1302 194 Pfam C-terminal duplication domain of Friend of PRMT1 134 188 IPR025715 -
Lele25g1302 194 MobiDBLite consensus disorder prediction 166 182 - -
Lele25g1302 194 MobiDBLite consensus disorder prediction 109 182 - -
Lele25g1302 194 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 49 192 - -
Lele25g1302 194 SMART FoP_duplication_2 117 194 IPR025715 -
Lele25g1302 194 SUPERFAMILY RNA-binding domain, RBD 40 164 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1302 Lele-ChrLele25 8807578 8809649 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1302 25 8807578 8809649 Lele27g0786 27 15969544 15972613 hybridization
Lele25g1302 25 8807578 8809649 Lele28g1298 28 8736992 8739835 hybridization