Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1276 ATGGAGAAGATCAACTCAGAGTTGAGGAAAGGTGCCTGGACCCAAGAGGAAGACAATCTTCTCAGAGCTTGCATTCACCAGTACGGCGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGGTTTGAAGAGATGCAGGAAAAGCTGTAGAATAAGGTGGTTGAATTATCTGAAACCTGACATCAACCGAGGAAACTTCACTGAAGACGAGGTTGATATGATTCGAAGATGGTCATTGATAGCTGGAAGGCTACCGGGAAGAACAGCGAATGACGTGAAGAACTTCTGGCACACAAAAATGCGCAGTAAGACAGAAGAAAATCAGAGGAAGAAGAAAGCAAAAGAGGTGATGAGCATAATCCCAGAGGAGACAGCCAAAGTAACACGGCACGTAATAATAAAACCTCGGCCTCATACTTTCTCTAAGAATTCGCCATGGCTAAGGAAGAATAATAAACTTGTTTCTGCATGTGAAAGTGTTGGTGCTGTTGGTGCTTCTACCAGTAGTACAGGTGGCAGTTTTGCACAGCCGTGTCCTCCTTCCGATTTAAGTAAGAGCGAATCAGACGAGTGGTGGGAGAGTTTACTGAAGAAGGAAGGAGATGAGGGGCAAAAGGGGATATCTATGATGGAGTTTTTTGACCAAGACTTTCTCAAAATGGAGGGTCCCCACGATTGGTGGAGTAACTTTTTATGA 696 0.444 MEKINSELRKGAWTQEEDNLLRACIHQYGEGKWHLVPQRAGLKRCRKSCRIRWLNYLKPDINRGNFTEDEVDMIRRWSLIAGRLPGRTANDVKNFWHTKMRSKTEENQRKKKAKEVMSIIPEETAKVTRHVIIKPRPHTFSKNSPWLRKNNKLVSACESVGAVGASTSSTGGSFAQPCPPSDLSKSESDEWWESLLKKEGDEGQKGISMMEFFDQDFLKMEGPHDWWSNFL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1276 231 ProSiteProfiles Myb-like domain profile. 58 100 IPR001005 -
Lele25g1276 231 MobiDBLite consensus disorder prediction 165 186 - -
Lele25g1276 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 104 IPR017930 -
Lele25g1276 231 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Lele25g1276 231 Gene3D - 65 120 - -
Lele25g1276 231 SUPERFAMILY Homeodomain-like 10 101 IPR009057 -
Lele25g1276 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 61 IPR017930 -
Lele25g1276 231 Gene3D - 7 63 - -
Lele25g1276 231 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 162 - -
Lele25g1276 231 FunFam Myb transcription factor 10 62 - -
Lele25g1276 231 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Lele25g1276 231 CDD SANT 12 57 IPR001005 -
Lele25g1276 231 SMART sant 9 59 IPR001005 -
Lele25g1276 231 SMART sant 62 102 IPR001005 -
Lele25g1276 231 MobiDBLite consensus disorder prediction 165 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1276 Lele-ChrLele25 8600449 8601382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1276 1 144 MYB Transcription Factor Family AT1G66390 57.895 9.67e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g1276 Myb_DNA-binding 2.5e-15 CL0123