Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1271 ATGGGGTTTTCCCAAGAAACCTGCACTGATTCTTGGGAGTCTTCAAATCCACAAAATGCTAATGATACAGCCACAGATAACTACTACGACTATAGCAAGCTCAAATTCAGAAGCACTTGGAGAAAAATGGTCTGGATGATTGGGTTTGCCTGTATTACCCTCCCTCGCCGCCGCCGGCGTAACGCTGGGGTGATTCAGGGTCAAGACAAAAACAGGGCATGGTTACTGGCGGAGTCCGGCGGGTGTGCGGCGGAGTCCGCGAATGCCGAACCACAATCGGTTCACTCATCTTTCAGATTCAACATATGTTCTCAGGTTGAGCTGGAATCTCTGGAAATGAGTTCTTCCGCTGCTGCGACGGTGTTGATGGTGAATTTGGATAATGGGGTGAGTGAGGCGAGTGAATCTCGAGCTCGGAAGCTAAAATGGTGGAGAATAGATTCATTCTGTAAAAGCATATTTCCAGTAACCAATACTCTGATCAGATTCAACTACAGTGAAATCCTATCTGCTACCCAGAATTTCTCTAAAGGAAGAGTATTGGGAAGAGGGGCTTTGAGCTGTGTTTTCAGAGGCAAAGTTGGAATTCTGAGAAGTGCGGTGGCAATTAAGATATTGGACATGGAAGACAAAGAGAGCTCAAAGTCTTTCTGTAGAGAATTGATGATTGCTAGCTCTCTTCACAACCCAAAAGTTGTTCCTCTTGTAGGGTTTTGTGCTGATCCAGAAGAGGGTTTGTTTCTGGTCTACAAATTTGTCTCAGGAGGAAGCTTAGAGCGCCACTTGCATGGGAAGAAGAAGGGTGTAAAGGGAAATTCACCACTACCTTGGTCTGTGAGGTATAAAGTTGCAGTTGGGATTGCAGAAGCAATCTCTTATCTGCATAATGGAACCAAAAGATGTGTTGTTCACAGAGACATTAAGCCCTCTAACATTCTTCTTTCCTCTAGAAAATCTCCCAAGCTATGTGATTTTGGATTAGCTACATGGACTTCAGCACCTTCAATACATTTCCTTTGCAAAACTGTTAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAGGTGTCTGATAAGACAGATATTTATGCTTTTGGAGTGGTGTTACTGGAACTCATAGCCGGTCGGAAGCCGATCGAAGCCAAAAGGCCACGAGGAGAAGAGAATTTGGTCTCATGGGCTAAACCATTGCTTCATCAGAAAGGGAAAGAAGCTATTGAAGAATTGCTTGATCCTCAACTCAATTGCACCTCAAAATCCTCGAATCAGATATATCGGGTGATAGAAGCTGCAGCAGCCTGTGTGACAAACGAGGAATCTCGAAGACCCGGCATTAAAGAGATCATCGCGATACTGAAAGGCGAAGAACCGATCTTATCTAAAAGGAGGAAGCATTCTTTTCATGCTAATGAATCCGTAATTGATTCTTATCCCCAGTTACAAGGAAAAAAAACAGAGATCAAAGGTCACTTGGCTTTGGCAATGTTAGGTGTTTCAGAGTTTGAGGATGATGATTACCTCTTTGGTCGTTAA 1545 0.4375 MGFSQETCTDSWESSNPQNANDTATDNYYDYSKLKFRSTWRKMVWMIGFACITLPRRRRRNAGVIQGQDKNRAWLLAESGGCAAESANAEPQSVHSSFRFNICSQVELESLEMSSSAAATVLMVNLDNGVSEASESRARKLKWWRIDSFCKSIFPVTNTLIRFNYSEILSATQNFSKGRVLGRGALSCVFRGKVGILRSAVAIKILDMEDKESSKSFCRELMIASSLHNPKVVPLVGFCADPEEGLFLVYKFVSGGSLERHLHGKKKGVKGNSPLPWSVRYKVAVGIAEAISYLHNGTKRCVVHRDIKPSNILLSSRKSPKLCDFGLATWTSAPSIHFLCKTVKGTFGYLAPEYFQHGKVSDKTDIYAFGVVLLELIAGRKPIEAKRPRGEENLVSWAKPLLHQKGKEAIEELLDPQLNCTSKSSNQIYRVIEAAAACVTNEESRRPGIKEIIAILKGEEPILSKRRKHSFHANESVIDSYPQLQGKKTEIKGHLALAMLGVSEFEDDDYLFGR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1271 514 FunFam probable serine/threonine-protein kinase PBL7 136 252 - -
Lele25g1271 514 SMART serkin_6 175 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1271 514 FunFam Putative receptor-like serine/threonine-protein kinase 253 472 - -
Lele25g1271 514 Gene3D Phosphorylase Kinase; domain 1 160 252 - -
Lele25g1271 514 PANTHER OS08G0249100 PROTEIN 129 475 - -
Lele25g1271 514 SUPERFAMILY Protein kinase-like (PK-like) 163 462 IPR011009 -
Lele25g1271 514 Pfam Protein kinase domain 176 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1271 514 ProSiteProfiles Protein kinase domain profile. 175 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1271 514 Gene3D Transferase(Phosphotransferase) domain 1 253 478 - -
Lele25g1271 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1271 Lele-ChrLele25 8569995 8572668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1271 163 459 Trihelix Transcription Factor Family AT1G70460 41.914 3.13e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele25g1271 Pkinase 5.3e-43 CL0016