Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1264 ATGGCCAAGAAGACAATCAAAGAACTGATGAGAAAGCCTTGCTGTGACAAAGAAGACACCAACAAAGGAGCTTGGTCTAAACAAGAAGATCAAAAGCTCATCGATTACATCCAAACTCATGGTGAAGGTTGCTGGCGTTCCCTTCCCAAAGCTGCAGGGCTCCATCGTTGTGGAAAGAGTTGCAGGTTGAGATGGATAAATTATTTGAAGCCTGATATCAAACGTGGAAACTTTGCTCAAGACGAAGAAGACCTCATCATCAAGCTCCATGCCCTCCTCGGTAACCGGTGGTCCCTGATAGCTGGAAGGTTGCCAGGAAGAACAGACAATGAGATAAAGAACTACTGGAATTCTCACATCCGCAGAAAGCTGATGAAGATGGGGATAGACCCTGAGAACCATAAGCTTATTCATCTTCATCACCAAAGCTTTCCTCTTCTTCATCGTCATCCTTCTCCTCATGATGCTGCTGCAACTTCCTCTGACTCCTTCATCAAGGAAAACCCTAATAATTCCAGTAACTTGAATCTTGACCTCACTATTGCTTTTCCTTCTCGCGCAGTACCAAACCCAAAGTTATCTGTTAATTCATCCCACAATAATAATACTACTAAGGACATGGAACAAAGCCAATCAGCTCCAACTCTTCCTCTATTTAACTAG 663 0.4344 MAKKTIKELMRKPCCDKEDTNKGAWSKQEDQKLIDYIQTHGEGCWRSLPKAAGLHRCGKSCRLRWINYLKPDIKRGNFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEIKNYWNSHIRRKLMKMGIDPENHKLIHLHHQSFPLLHRHPSPHDAAATSSDSFIKENPNNSSNLNLDLTIAFPSRAVPNPKLSVNSSHNNNTTKDMEQSQSAPTLPLFN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1264 220 FunFam MYB-related transcription factor 21 74 - -
Lele25g1264 220 Gene3D - 77 142 - -
Lele25g1264 220 SMART sant 21 71 IPR001005 -
Lele25g1264 220 SMART sant 74 122 IPR001005 -
Lele25g1264 220 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Lele25g1264 220 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Lele25g1264 220 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Lele25g1264 220 FunFam MYB transcription factor 76 137 - -
Lele25g1264 220 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Lele25g1264 220 MobiDBLite consensus disorder prediction 148 169 - -
Lele25g1264 220 MobiDBLite consensus disorder prediction 190 220 - -
Lele25g1264 220 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 10 204 - -
Lele25g1264 220 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Lele25g1264 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Lele25g1264 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Lele25g1264 220 CDD SANT 24 69 IPR001005 -
Lele25g1264 220 Gene3D - 22 74 - -
Lele25g1264 220 CDD SANT 77 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1264 Lele-ChrLele25 8499155 8502360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1264 9 185 MYB Transcription Factor Family AT4G09460 55.072 4.43e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g1264 Myb_DNA-binding 2.1e-14 CL0123