Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1256 ATGGCAATCGGATTAATGGAGGTGCTTGTGGTCAAAGCTAAGGGCCTTCCTCTCTCTGATCTCTTTGCTCGTATCGATCCCTACGTTCTGATTCAGTACAAAGGCCAAGAGCGCCAGACTAGTGTGGTTCATGAGGGAGGTAGCAATCCAGTGTGGAACGAGAAATTTGTATTCAGAGCAGAATATCCAGGATCAGGAGACCAATTCAAGCTAATCTTTAAAATCAAGGACAAGGACTTCTTCTCTTCTGATGACTTCCTTGGCCAAGCCGAAATATATGTGGAGGATTTGTTGGCTGTAGGAGCAGAGAATGGAAAAGCTGAGCTTCATCCTCAAAAGCATAGAGTGGTTGGTGCAGATCAATCTTACTGTGGAGAGATTGAAGTTGGTATAACTTTCACCCTTAAGGAAGCAGACGAATCTCTTGATGAAAACATTGGAGGATGGAAGCAGAGCGACTACTAG 465 0.4452 MAIGLMEVLVVKAKGLPLSDLFARIDPYVLIQYKGQERQTSVVHEGGSNPVWNEKFVFRAEYPGSGDQFKLIFKIKDKDFFSSDDFLGQAEIYVEDLLAVGAENGKAELHPQKHRVVGADQSYCGEIEVGITFTLKEADESLDENIGGWKQSDY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1256 154 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Lele25g1256 154 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
Lele25g1256 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 133 IPR035892 -
Lele25g1256 154 SMART C2_3c 5 106 IPR000008 -
Lele25g1256 154 Pfam C2 domain 6 101 IPR000008 -
Lele25g1256 154 Gene3D C2 domain 2 152 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1256 Lele-ChrLele25 8430065 8432020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1256 3 109 C2H2 Transcription Factor Family AT4G21160 33.645 2.02e-12 61.6