Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1252 ATGGTGTGCAAGAAGAGGCTAGAATATGGATTCAATGGCTTTCAGGTCCCCTTTATTCCTAGAGCTCCTAGATCTGTAAGAAGGAGGGTTCTTTCCAAGAAAGAAGAGGACGGTCAATTTTGTGCCATTGAAGTATTGGCATCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCAGCTTCTAGCAATGCATCGGAAGGAAATCACCAGCCGGCCTCTGGTCAAGGCGCTGTTGAACAGGAAAGTCAAGGTGAAGCCAAACCATTAGTAGCAGAAGGTGTTCATCATGGAAGTTGTGCAGAGAGTGCCTTTATGACTGAGCTAGTCGCACGAAATTCTAGCCTGAAGTATCTTGGGCAAGCTGAGGCTGATGCCGTACCAGAATGCACTTCCATTACTAATCCTGCTGATTGCTGCAAGAAAATAGAACCTAACATTAAGCCCGAAATATGCAAATGGGAGGATCAAGTTGGACATTATTCTAGTAGTAGTTTAGCAGAAGCACCCCGAAATTTTAGAGAGTCTTATAATAATAGTAATATAAACAATGGCTTTAAAAGGGAACAAGAAGCTGGGAGTTCAGGCATTGAGGGACCAAGTCTTGCTGATAAATGTAGTTTGAAGAATCCTTTGGAGTATCGAGTTAACTCTCATGCAATAAGTAACTCAGTTAGTAAAATTAAATATCCATTCTCTAAAGGAACTTTTCCAAATAGTTCCTTTTCTAATTATGGCAATAATAGTAAGGTAGGTTTTAGAGATGATGACGAAAACTTTATCAGGTGCAACAAAAATAGCACCAAATCAAAGGCTTTTAAGCCTCCGCATCAGATTGCACACCGAAGAATCAGAAAGCTTGTGACTTCCAGATACTGGAAGGTTGCTCCAAAGTTGAAAGATTGCGAGCTTTCCAGATCTGATGCTGGAGCAAAGCCTCTTTTTCAGAAGAGGAAGGCTTGTCACAGTTTTGAAAGAGGTCATTATGATACTCTTTCCAAGAGGAGGAAATTCTCTAATCGGTGTTCAGGCCTGACACTTGATGGAGGATTCAGCAGTGAGAGCGTATCTAATTCACTTGAGAAAGGAATGGATGGCTACAACCCTAGCTCATCCTCAGAACAGCATGAATCAAAGGATTCTCATGTGAAGTTTAGCATTAAGTCTTTCAAGATACCAGAGCTTTATATTGAGGTTCCTGAAACTGCTACTGTTGGTTCTCTAAAGAGGACAGTCATGGAGGCTGTGATGGCTATACTTGGAGGTGGAGTGCATGTTGGTGTTGTTCTTCAGGGGAAGAAAGTTAGAGATGACAACAGAACTCTTGAGCAGACTGGTTTATCTTGTGAAGAAAATATCGATACCCTTGGTTTCACGTTGGAGCCGAGTTCCTTACAAGGCTCTCCTTCTGTCTGTATTGGTGATCCTTCTCATCATGAACCATCCCATTCGATCAGGTCCCCTAGAACTCCTGTCTTAGATTCAGGGATTACTGATGTCTTACATGACTCTCCCTTGCTGACTACTCCGAGCAAAGCTATCGAAAGTAACCATGAATCAATTTCTTCTCCCACTGACACGATGACTGACAAAGTAGAGCCAGATTCCAAAACTTTAGTAGTTGTTCCTGATAGGAGCACAGAACCCTTGGCTGTAGTTCCAGTGACTCAGAAAACTAAGCGCTCTGAGCTTGTACAGCGTCGAACCAGGAGACCCTTCTCAGTGTCTGAGGTAGAAGCACTTGTTCAGGCTGTTGAAGAACTTGGAACTGGAAGGTGGCGTGACGTTAAGCTGCTTGCTTTTGAAAATGCAGACCATAGGACTTATGTTGACTTGAAGGACAAATGGAAAACGTTAGTACACACAGCAAGAATATCTCCCCAACAAAGAAGAGGAGAGCCAGTACCTCAGGAGCTGTTGGACAGAGTGTTGGCTGCTCATGCTTTCTGGTCACAGCATCAAGGCAAGCAGGAGCAACATGGGAAGCATCATCATCAACAACCTTCGGGAACTCCGAACAAAGTCAAAGAATCCTCAGCTCCTCAATTTCTCAGTCTTGTTGCTGGTGAAGCTGGTGGTGGTGTCATCCAACCCATTGGAACAATGTTAAAACAAAAGATATAA 2124 0.4313 MVCKKRLEYGFNGFQVPFIPRAPRSVRRRVLSKKEEDGQFCAIEVLASLAGKLLQESESSASSNASEGNHQPASGQGAVEQESQGEAKPLVAEGVHHGSCAESAFMTELVARNSSLKYLGQAEADAVPECTSITNPADCCKKIEPNIKPEICKWEDQVGHYSSSSLAEAPRNFRESYNNSNINNGFKREQEAGSSGIEGPSLADKCSLKNPLEYRVNSHAISNSVSKIKYPFSKGTFPNSSFSNYGNNSKVGFRDDDENFIRCNKNSTKSKAFKPPHQIAHRRIRKLVTSRYWKVAPKLKDCELSRSDAGAKPLFQKRKACHSFERGHYDTLSKRRKFSNRCSGLTLDGGFSSESVSNSLEKGMDGYNPSSSSEQHESKDSHVKFSIKSFKIPELYIEVPETATVGSLKRTVMEAVMAILGGGVHVGVVLQGKKVRDDNRTLEQTGLSCEENIDTLGFTLEPSSLQGSPSVCIGDPSHHEPSHSIRSPRTPVLDSGITDVLHDSPLLTTPSKAIESNHESISSPTDTMTDKVEPDSKTLVVVPDRSTEPLAVVPVTQKTKRSELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKLLAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAFWSQHQGKQEQHGKHHHQQPSGTPNKVKESSAPQFLSLVAGEAGGGVIQPIGTMLKQKI 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1252 707 MobiDBLite consensus disorder prediction 57 86 - -
Lele25g1252 707 Gene3D - 558 662 - -
Lele25g1252 707 SMART sant 569 622 IPR001005 -
Lele25g1252 707 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 566 624 IPR017930 -
Lele25g1252 707 MobiDBLite consensus disorder prediction 651 679 - -
Lele25g1252 707 MobiDBLite consensus disorder prediction 57 81 - -
Lele25g1252 707 SUPERFAMILY Homeodomain-like 571 652 IPR009057 -
Lele25g1252 707 SUPERFAMILY Ubiquitin-like 377 461 IPR029071 -
Lele25g1252 707 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 659 IPR031105 -
Lele25g1252 707 MobiDBLite consensus disorder prediction 356 380 - -
Lele25g1252 707 CDD SANT_TRF 571 621 - -
Lele25g1252 707 MobiDBLite consensus disorder prediction 356 374 - -
Lele25g1252 707 ProSiteProfiles Myb-like domain profile. 565 620 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1252 Lele-ChrLele25 8364994 8368405 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1252 25 8364994 8368405 Lele26g1264 26 8317193 8320701 ECH
Lele41g0048 41 350904 354512 Lele25g1252 25 8364994 8368405 ECH
Lele42g0048 42 375503 378796 Lele25g1252 25 8364994 8368405 ECH
Lele43g1311 43 21239927 21244822 Lele25g1252 25 8364994 8368405 ECH
Lele44g1303 44 21293703 21300749 Lele25g1252 25 8364994 8368405 ECH
Lele25g1252 25 8364994 8368405 Lele25g1252 25 8364994 8368405 ECH
Lele25g1252 25 8364994 8368405 Lele27g0831 27 16347726 16351111 hybridization
Lele25g1252 25 8364994 8368405 Lele28g1256 28 8351355 8354864 hybridization