Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1247 ATGAAAAGTCTGAGGGATTCTTTGGTCTTCACTTCACGTGTCCTACAAATAAAGCAGTGGGTTTCCCTTCATGCCAGTTTCCAAAACATGGGCGATGCTATTGATTTGACTGGTGATGGAGGTGTCGTAAAGACCATTGTGAAAGGAAGCAAAGTTGACGCTGTGGGTCCTACTGAAGATTTTCCCCTTGTTGATGTTCATTATGAAGGAACACTTGCTGATACTGGTGAAGTATTTGATACCACACATGAGGATAACACAGTGTTTACTTTTGAGCTTGGGAAGGGCAGTGTTATCAAGGCTTGGGAAATTGCAGTGAAGACCATGAAGGTTGGAGAAATTGCAAAAATTACTTGCAAGCCAGAATATGCATATGGCAGTGCAGGATCTCCACCAGATATCCCCCCAGGTGCGACACTTGTTTTTGAAGTTGAGCTAGTTGCTTGTAAGCCCCGGAAGGGTTCTAGTCTGGGAAGTGTTTCAGACGAGAGGGCCAGGCTAGAAGAGCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCCAAAGAGGAGGAGAAAAGGAAGAGAGAGGAAGCAAAAGCTGCGGCTGCTGCTCGTGTGCAAGCCAAGTTAGAGGCCAAGAAAGGTCAAGGAAAGGGTAAATCCAAAGCAAAGTAG 654 0.4602 MKSLRDSLVFTSRVLQIKQWVSLHASFQNMGDAIDLTGDGGVVKTIVKGSKVDAVGPTEDFPLVDVHYEGTLADTGEVFDTTHEDNTVFTFELGKGSVIKAWEIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPGATLVFEVELVACKPRKGSSLGSVSDERARLEELKKQREIAAAAKEEEKRKREEAKAAAAARVQAKLEAKKGQGKGKSKAK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1247 217 MobiDBLite consensus disorder prediction 177 217 - -
Lele25g1247 217 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 31 210 - -
Lele25g1247 217 Coils Coil 160 199 - -
Lele25g1247 217 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 63 147 IPR001179 GO:0003755
Lele25g1247 217 SUPERFAMILY FKBP-like 37 153 - -
Lele25g1247 217 FunFam Peptidyl-prolyl cis-trans isomerase 37 151 - -
Lele25g1247 217 Gene3D - 23 149 IPR046357 GO:0003755
Lele25g1247 217 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 150 IPR001179 GO:0003755
Lele25g1247 217 MobiDBLite consensus disorder prediction 177 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1247 Lele-ChrLele25 8301775 8304358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1247 35 175 Calmodulin-binding Proteins AT5G48570 36.486 5.31e-12 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1247 25 8301775 8304358 Lele25g1247 25 8301775 8304358 ECH
Lele25g1247 25 8301775 8304358 Lele27g0835 27 16413056 16415194 hybridization
Lele25g1247 25 8301775 8304358 Lele28g1253 28 8284498 8287449 hybridization