Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1232 ATGCAAAAGTACAAGGTTAGGACAACGACAGGACTCGGCTCTTCATGTGGAGCATGCAAGTTCCTCCGCAGAAAGTGTACTGCCGATTGCATATTTGCTCCTTATTTCTCCTATGACCAGGCTGCTACCCATTTTGCTGCAGTGCACAAGGTTTTTGGTGCCAGTAATGTCTCTCGGCTACTGCTATACCTACCGGTGCAGACTAGAAGCGATGCAGCCATCACAGTGTCTTACGAGGCACTCGCTCGGATGCATGATCCTGTATATGGTTGTGTTGCTCAAATCTCTGCCCTGCAGCAACAGGTTGCAAGCTTGCAAGAGGAAATAGATAAACTTGGTAATATGATGACCAACTCTCCTGTTGGTTCTGCCATTTCCGGTGGCAGTTCTCAAGCCTCGACAAGCAGAAACAAAGACGGGATAGATTTTTCATGGCAGCAAGATGCAATAAATACACAACTTTATCATACTCAACTATCTACTCTGCTTCCTCACCAAGCAAGTGATACAGCCTACCAAGGCTTGGAAGGACAGGTTGATTTGGATTTTCCAGTTGCTCTTCCATTCGAAGACCGCGTATTTGATGAGCCAGACCTTAATTCATTAGAGAAGCTCCTATCAGGAATTGACCAACAGGTTTTCATCAATCATCCTTGA 657 0.4566 MQKYKVRTTTGLGSSCGACKFLRRKCTADCIFAPYFSYDQAATHFAAVHKVFGASNVSRLLLYLPVQTRSDAAITVSYEALARMHDPVYGCVAQISALQQQVASLQEEIDKLGNMMTNSPVGSAISGGSSQASTSRNKDGIDFSWQQDAINTQLYHTQLSTLLPHQASDTAYQGLEGQVDLDFPVALPFEDRVFDEPDLNSLEKLLSGIDQQVFINHP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1232 218 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Lele25g1232 218 Coils Coil 95 115 - -
Lele25g1232 218 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
Lele25g1232 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1232 Lele-ChrLele25 8203581 8204311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1232 13 118 AS2 family AT5G06080 73.585 3.72e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele25g1232 LOB 5.2e-35 No_clan