Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1230 ATGGCGAATCGGTGGTGGGCTGGTAACGAGGCAATGAGACCTAATAAAGATCCCTTGTTGTCTTCTCCATCGCTACATCTGAGAAACCCAGAAGACGGCCATGGCGGATTCAATCGACTCGGGCCAAGACGGGAGCAAGATTTTCTGGAAAACACTTATAACAACGCGACTCCAACCAATAGCAGCAATAGCAACACTAACGCCAACACAAACACAAACACAACCTCGCAGAGCCAGAACATCGTCGACGATGACGATAGCCGACACAACAGTAGCCGCGAAGCAGATGATCAAAACCCAGGTAGCCATGACGGTGCCGCCAAGCCGGGAAGCAGCAGCTGCCGACGTCCCCGAGGCCGGCCGCCCGGGTCGAAGAACAAGTCGAAGGCACCGGTGGTTGTGACAAAGGAGAGTCCTAATGCCCTCCGGAGCCACGTGTTGGAAATCTCCAGCGGCAGCGATGTTGCCGAGAGCCTCTCCACCTTCGCGAACCGGAGACACCGCGGGGTGTCAGTTCTCAGCGGAAGTGGCATTGTAACCAATGTCACTCTCCGGCATCCGGCGGCGCCAGGTGGGGTTATCACACTAAATGGAAGGTTCGAGATCCTGTCACTATCTGGGGCGTTTTTGGCAGCCCCTTCGCCGGCTGGAGCCACGGGGCTAACGGTGTATCTCGCCGGTGGACAAGGGCAAGTTGTTGGCGGAAATGTGGTGGGTTCATTGGTAGCATCAGGGCCAGTATTGGTGATTGCAGCGACATTTGCTAATGCCACTTACGAGAGATTGCCACTTGAAGATGAACCATCTGGGGAAGATAATGTTGAAGTACAAGCACAGCAACAATCAGGAGTAAATTCAGCAACTTCTGGGCCTTCTTCAGCATCTCAAGCTTTGAATGAACAAGTTTCAATGCCTATGTTCAATAACATGCCACCAAATTTGCTACAACCAGGTAATGATCAAATGCCACATGATATGTTCTGGGCGCCTCATGCTCGCCAACCTCCTTACTGA 1014 0.5296 MANRWWAGNEAMRPNKDPLLSSPSLHLRNPEDGHGGFNRLGPRREQDFLENTYNNATPTNSSNSNTNANTNTNTTSQSQNIVDDDDSRHNSSREADDQNPGSHDGAAKPGSSSCRRPRGRPPGSKNKSKAPVVVTKESPNALRSHVLEISSGSDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRHPAAPGGVITLNGRFEILSLSGAFLAAPSPAGATGLTVYLAGGQGQVVGGNVVGSLVASGPVLVIAATFANATYERLPLEDEPSGEDNVEVQAQQQSGVNSATSGPSSASQALNEQVSMPMFNNMPPNLLQPGNDQMPHDMFWAPHARQPPY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1230 337 MobiDBLite consensus disorder prediction 264 297 - -
Lele25g1230 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 139 267 - -
Lele25g1230 337 CDD DUF296 143 226 IPR005175 -
Lele25g1230 337 Gene3D - 142 282 - -
Lele25g1230 337 ProSiteProfiles PPC domain profile profile. 139 277 IPR005175 -
Lele25g1230 337 MobiDBLite consensus disorder prediction 48 81 - -
Lele25g1230 337 MobiDBLite consensus disorder prediction 317 337 - -
Lele25g1230 337 MobiDBLite consensus disorder prediction 1 138 - -
Lele25g1230 337 FunFam AT-hook motif nuclear-localized protein 142 269 - -
Lele25g1230 337 MobiDBLite consensus disorder prediction 82 101 - -
Lele25g1230 337 MobiDBLite consensus disorder prediction 273 297 - -
Lele25g1230 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 71 331 IPR014476 GO:0003680
Lele25g1230 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 255 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1230 Lele-ChrLele25 8182125 8183138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1230 1 336 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 50.716 4.70e-72 224