Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1229 ATGAAGAAGTCAGCTCCTGGTGAAAACACTGCTGTAGTCTGCTGGCCAGTACCAATCTGTGACCCTTTTTCAGTTTCAAAGGCATTTATACGTAGAGATAGATCATCTTCATTTGATCTGTGGTATTCAAAAATGGCGAATCGGTGGTGGGCCGGTAACGTGGCAATGAGACCGAAAGATCCTTTGTCGTCTTCTCCATCATTTCATCTGAGAAATCCAGAAGATGACCATGTTGGGTTGAACCGATTCGGGGCTGTACGAGTTCAAGATTTTCTAGAAAACACCAATAACAACACCACTGCTCAGACCAATAGCAGCAACAGCAACACTAACGCCAACACAAACACAACCTCTCAGAGCCAGAACGCCGACGACGGAGACAGCAGAGATAAGGGGCGTGAAGCAGATGATCAAAACCTAGGTAGCCACGACAGCACGGAGCCGGGCAGCAGCAGCGGTCGCAGGCCCCGAGGCCGCCCTGCTGGGTCGAAGAACAAGCCGAAGCCACCGGTGGTTGTAACAAAGGAGAGTCCTAACGCCCTCCGGAGCCACGTGTTGGAAATCTCCAGCGGCAGTGATGTTGCCGAGAGCCTCTCCACCTTCGCGAACCGGCGACACCGTGGTGTGTCGGTGCTCAGCGGGAGTGGCATTGTAACCAACGTCACTCTCCGGCAGCCGGCAGCAGCAGCTGGAGTTATCACACTAAATGGAAGGTTCGAGATTCTATCTCTTTCGGGGGCATTTTTGCCGGCCCCGTCACCACCCGGGGCCACCGGGCTAACCGTGTACCTCGCCGGCGGACAAGGGCAGGTTGTCGGTGGAGCTGTGGTGGGTTCACTGGTAGCATCAGGGCCCGTATTGGTGATTGCGGCGACATTCGCAAATGCCACTTATGAGAGATTGCCACTTGAAGCTGAGCCATTTGGAGAAGATCAAGTTGAAGGGAAAACACAGCAACAGCAACAATCAGGAGTGAATTATTCAGCAACTTCTGGTGGTGGTCCTTCATCAACATCTCAAGCTATGAACGAACAACAAGTTTCGATGCCGATGTTCAATAATTTGCCGCCAAATTTGATACCAAACAATGGTCAAATGCAAGATCATGAAGTGTTCTGGGGGACCCAAGATCGCCATCCTCCTTCTTACTGA 1152 0.5191 MKKSAPGENTAVVCWPVPICDPFSVSKAFIRRDRSSSFDLWYSKMANRWWAGNVAMRPKDPLSSSPSFHLRNPEDDHVGLNRFGAVRVQDFLENTNNNTTAQTNSSNSNTNANTNTTSQSQNADDGDSRDKGREADDQNLGSHDSTEPGSSSGRRPRGRPAGSKNKPKPPVVVTKESPNALRSHVLEISSGSDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRQPAAAAGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGAVVGSLVASGPVLVIAATFANATYERLPLEAEPFGEDQVEGKTQQQQQSGVNYSATSGGGPSSTSQAMNEQQVSMPMFNNLPPNLIPNNGQMQDHEVFWGTQDRHPPSY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1229 383 FunFam AT-hook motif nuclear-localized protein 181 308 - -
Lele25g1229 383 MobiDBLite consensus disorder prediction 96 123 - -
Lele25g1229 383 MobiDBLite consensus disorder prediction 124 141 - -
Lele25g1229 383 Gene3D - 181 320 - -
Lele25g1229 383 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 110 374 IPR014476 GO:0003680
Lele25g1229 383 MobiDBLite consensus disorder prediction 96 178 - -
Lele25g1229 383 SUPERFAMILY AF0104/ALDC/Ptd012-like 178 308 - -
Lele25g1229 383 MobiDBLite consensus disorder prediction 310 343 - -
Lele25g1229 383 CDD DUF296 182 264 IPR005175 -
Lele25g1229 383 MobiDBLite consensus disorder prediction 313 343 - -
Lele25g1229 383 Pfam Plants and Prokaryotes Conserved (PCC) domain 182 294 IPR005175 -
Lele25g1229 383 ProSiteProfiles PPC domain profile profile. 178 314 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1229 Lele-ChrLele25 8171352 8173026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1229 45 383 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.429 1.48e-77 240