Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1224 ATGTGGCTGAAGAGGAAGCAAACGTTGAAGTCACATATTGATGCCGCAAGATCGTCTTCATGGGAAGAGAGGGCTTTTGCAGAAGATTCAGCTAGGATACTTGGTGGCTACGTATGGCCTCCAAGATCTTACTCTTGTACTTTCTGCAAACGAGAGTTCAGGTCTGCTCAAGCTCTTGGGGGTCACATGAATGTTCACAGAAGGGATAGAGCTAGGCTCAAACATAGCCAGCAGCAACAAACTGTAATTCCTCCTCATGATTGTAAGAGATCTTCTGATTCTTCAGAGGTCAATGGAAGGGAAGAAGAAGATTTTGCAGGCTTTTATAAAAATCATAATAATAATTATGTTGAAACAGACTTGTCCGTGGGATTACTACCTTCATCATCATCAGCTGAAGAAGCTTTTTCTTTAAGTTGTAAGAGAACTAAGACTACTTGTTCCAATATTTCTTCAGTCTTCATTAAGCCGTTCTCAAACGATCACGCAGCAGCAGCAGCAAGCCTAGTTTTCCAATCTGCAGAAATGGTGATCGGAGTTAATAAGCCTAAAATAGAAGACTTGGATCTTGAACTCAGGCTGGGGAAATCACAGAAAGTTCAGTGA 606 0.4158 MWLKRKQTLKSHIDAARSSSWEERAFAEDSARILGGYVWPPRSYSCTFCKREFRSAQALGGHMNVHRRDRARLKHSQQQQTVIPPHDCKRSSDSSEVNGREEEDFAGFYKNHNNNYVETDLSVGLLPSSSSAEEAFSLSCKRTKTTCSNISSVFIKPFSNDHAAAAASLVFQSAEMVIGVNKPKIEDLDLELRLGKSQKVQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1224 201 Gene3D Classic Zinc Finger 41 104 - -
Lele25g1224 201 PANTHER OS07G0101800 PROTEIN 17 197 - -
Lele25g1224 201 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Lele25g1224 201 MobiDBLite consensus disorder prediction 69 96 - -
Lele25g1224 201 SMART c2h2final6 44 66 IPR013087 -
Lele25g1224 201 Pfam C2H2-type zinc finger 44 68 - -
Lele25g1224 201 SUPERFAMILY beta-beta-alpha zinc fingers 41 70 IPR036236 -
Lele25g1224 201 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1224 Lele-ChrLele25 8137504 8138109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1224 22 195 C2H2 Transcription Factor Family AT5G06070 39.151 9.96e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele25g1224 zf-C2H2_6 1e-06 CL0361