Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1223 ATGAGTTGTATGATGGCTGGGTTATGCTGTGGTGTTGTTGGAGAAGGTGAGACTCCGACTCCGATTGAGCCGGGGCGATCTTCTCGTCGCCGGAGGTCGGATATAATGCCCTTGAAGCTTATGGCTGACATGGCTGTGCCGCCGCCTGAGACCTGCAGCCTGAAGCGCCAAAAACTGGATCTCTTTACTAATTCTCCGACGCAACCAAGAGACTGCGTGTACGCAGTCGAGAATTGTGCATCTAGTGGTGTTAAGAAGGAAGAGGAACAAAACAAGGAGGAACAGAAAGGGGATGAAGTTCTGTCGACGGTTTCTTCGTTAAATTCAACTGATAAAAAAGAGTGTGATAATGAGGATATTCGGGAGTGTCCAAAGTTTGGGGTTACATCGGTTTGTGGTAGAAGGAGGGATATGGAAGATGCGGTTTCAGTTCGTCCGTCGTTCTGCCAAGAACATGGTCAAAATTTGGAAAGGTTTCACTACTTCGGCGTGTTCGACGGCCACGGTTGCTCTCATGTAGCGACGATCTGTAAGGATAGGTTGCATGAGATGGTAAAAGAAGAGGTCGGCGGAGCACGAGAGGATTTGGAATGGAAGTCTATGATGGAACAGAGTTTTGCTCGGATGGACGAGGAGGTGCAGAATTGGAGCCAGAGCAACCAGAGCTCCACTTGCAGGTGCGAGCTTCAGACGCCTCACTGCGACGCCGTCGGATCTACCGCGGTTGTTGCCGTTGTTACGCCAGACAGGATCATCGTCTCCAACTGTGGCGACTCACGTGCCGTTCTCTGCCGAAACGGCGTGGCCGTCCCTCTTTCGTCCGATCACAAGCCCGACCGACCTGACGAGTTGCTCCGAGTTCAAGCCGCCGGAGGACGGGTCATTTACTGGGATGGTCCTAGGGTTCTCGGAGTTTTGGCAATGTCCAGAGCCATAGGGGACAATTATCTTAAACCATACGTTATATCGGAGCCGGAGGTGACGGTGACGGAGCGCACAGACGAGGACGAGTGTTTGATACTTGCGAGTGACGGCCTGTGGGACGTGGTGTCAAACGACACCGCATGTGGGGTGGTGCGGATGTGCCTGAAGGTGCAGAAACCGCCGTCACCGCCGGGATCCCCGGGAAGCGACATGGCAGCGGTGTGCTCCGCCGCTGATGGGTCGGATAAGTCATGCTCGGACGCATCCATTTTGCTGACTAAGCTAGCTTTGGCCCGGCACAGTACAGACAATGTGAGCGTGGTGGTGGTGGATTTGAGGAGAGAGAAACAACCAGAATGTAACTCCGACGAGGGGAACAATAATTAA 1311 0.5332 MSCMMAGLCCGVVGEGETPTPIEPGRSSRRRRSDIMPLKLMADMAVPPPETCSLKRQKLDLFTNSPTQPRDCVYAVENCASSGVKKEEEQNKEEQKGDEVLSTVSSLNSTDKKECDNEDIRECPKFGVTSVCGRRRDMEDAVSVRPSFCQEHGQNLERFHYFGVFDGHGCSHVATICKDRLHEMVKEEVGGAREDLEWKSMMEQSFARMDEEVQNWSQSNQSSTCRCELQTPHCDAVGSTAVVAVVTPDRIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMAAVCSAADGSDKSCSDASILLTKLALARHSTDNVSVVVVDLRREKQPECNSDEGNNN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1223 436 ProSiteProfiles PPM-type phosphatase domain profile. 125 420 IPR001932 -
Lele25g1223 436 MobiDBLite consensus disorder prediction 84 99 - -
Lele25g1223 436 SMART PP2C_SIG_2 145 420 IPR001932 -
Lele25g1223 436 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Lele25g1223 436 MobiDBLite consensus disorder prediction 84 113 - -
Lele25g1223 436 CDD PP2Cc 125 420 IPR001932 -
Lele25g1223 436 FunFam Protein phosphatase 2C 37 120 427 - -
Lele25g1223 436 Gene3D - 120 429 IPR036457 -
Lele25g1223 436 Pfam Protein phosphatase 2C 126 412 IPR001932 -
Lele25g1223 436 PANTHER PROTEIN PHOSPHATASE 99 420 - -
Lele25g1223 436 SMART PP2C_4 113 418 IPR001932 -
Lele25g1223 436 SUPERFAMILY PP2C-like 125 421 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1223 Lele-ChrLele25 8124521 8126270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1223 112 425 PP2C-type Phosphatase Gene Family AT1G07430 63.363 6.60e-146 421