Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1219 ATGGGCTCAATACACGTGTGCTCACGAACTGTCATGGTGCAACACCTATTGGCCGCTGCTGATATGTATAATATTGATTGTCTGAAAACGTTATGCGAATCAATTTTATGTGAAGAAATCAATACTAACACTGTAGCAACATCACTTGCACTGGCTGAGCAACATCACTGCCCGCAACTTAAGGCCTCTTGTTTAAACTTTGTTGCAAATCCAGCAAATTTAGTAGATTCTTACACTCTTTAA 243 0.3951 MGSIHVCSRTVMVQHLLAAADMYNIDCLKTLCESILCEEINTNTVATSLALAEQHHCPQLKASCLNFVANPANLVDSYTL 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1219 80 Gene3D Potassium Channel Kv1.1; Chain A 2 41 IPR011333 -
Lele25g1219 80 Gene3D - 42 77 - -
Lele25g1219 80 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 14 68 IPR045005 GO:0016567
Lele25g1219 80 Pfam BTB/POZ domain 9 38 IPR000210 GO:0005515
Lele25g1219 80 SUPERFAMILY POZ domain 11 39 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1219 Lele-ChrLele25 8087797 8088564 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele25g1219 BTB 3.5e-05 CL0033