Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1215 ATGTGCTTGATTGCTTATCCAGCTTTAGGTTTTCGGCTTAGCTGCATCTGTGTCATAGTCATCATAACACCTGTTAGCTCAGGAAAAGCAAGAGGAATAATGAAGGCCCTGATTCTAGTTGGAGGCTTTGGAACAAGACTGAGGCCATTGACACTAAGTGTCCCCAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATCCTGCATCAGATAGAGGCTCTTAAGTCTATTGGAGTTAATGAAGTGGTATTAGCCATCAATTACCAACCAGAGGTGATGTTGAACTTCTTGAAGGAATACGAGGCAAAGCTAGGGATCAAGATCACATGTTCGCAAGAAACTGAACCATTGGGTACAGCAGGTCCTCTGGCTCTTGCCAGGGACAAGCTGATAGATGGCTCTGGAGATCCATTTTTTGTTCTCAACAGTGATGTTATTAGTGAGTACCCACTTAAGGAGATGGTTCAGTTCCATAAATCTCATGGAGGAGAGGCATCCATAATGGTGACAAAGGTAGATGAGCCATCGAAGTATGGTGTGGTTGTCATGGAGGAGGCGACAGGGAAGGTTGAGAAATTTGTGGAAAAGCCTAAGTTGTTTGTTGGTAACAAAATCAATGCTGGAATTTACTTAGTGAATCCCTCAGTTCTGGATCGCATTGAGCTAAGGCCTACATCTATTGAGAAAGAGGTGTTTCCAAAGATTGCATCAGAGCAAAAGCTATTTGCAATGGTCCTTCCTGGGTTTTGGATGGATATTGGACAGCCAAGGGACTATATTTCTGGTCTGAGACTCTACCTGGATTCACTGAAGAAAAAAGCTTCTTCCAAGTTAGCCACCGGTCCTCACATTGTGGGGAATGTCATAGTGGATGAGACTGCCAAAATTGGCGAAGGATGTCTTATTGGACCTGATGTTGCTATTGGTCCCAGTTGCATCGTCGAGTCAGGTGTTCGTCTCTCCCGCTGCACCGTGATGCGAGGAGTCCGAATTAAGAAACATGCCTGCGTTTCGAGTAGTATTATTGGGTGGCATTCCACCGTAGGACAATGGGCTCGCGTGGAGAACATGACTATTCTCGGAGAAGATGTCCATGTTTGTGATGAGATATACAGCAACGGTGGTGTGGTTCTGCCCCACAAGGAGATCAAGTCCAGCATTTGGAAACCCGAGATAGTCATGTGA 1185 0.4523 MCLIAYPALGFRLSCICVIVIITPVSSGKARGIMKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKSIGVNEVVLAINYQPEVMLNFLKEYEAKLGIKITCSQETEPLGTAGPLALARDKLIDGSGDPFFVLNSDVISEYPLKEMVQFHKSHGGEASIMVTKVDEPSKYGVVVMEEATGKVEKFVEKPKLFVGNKINAGIYLVNPSVLDRIELRPTSIEKEVFPKIASEQKLFAMVLPGFWMDIGQPRDYISGLRLYLDSLKKKASSKLATGPHIVGNVIVDETAKIGEGCLIGPDVAIGPSCIVESGVRLSRCTVMRGVRIKKHACVSSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSIWKPEIVM 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1215 394 FunFam mannose-1-phosphate guanyltransferase beta 34 265 - -
Lele25g1215 394 Pfam Bacterial transferase hexapeptide (six repeats) 294 328 IPR001451 -
Lele25g1215 394 CDD M1P_guanylylT_B_like_N 34 267 IPR045233 GO:0004475|GO:0005525|GO:0009298
Lele25g1215 394 SUPERFAMILY Nucleotide-diphospho-sugar transferases 34 345 IPR029044 -
Lele25g1215 394 Pfam Nucleotidyl transferase 35 262 IPR005835 GO:0009058|GO:0016779
Lele25g1215 394 Gene3D Hexapeptide repeat proteins 268 388 - -
Lele25g1215 394 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 34 393 - -
Lele25g1215 394 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 33 266 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1215 Lele-ChrLele25 8060525 8063296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1215 26 180 Eukaryotic Initiation Factors Gene Family AT4G18300 24.540 7.19e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1215 25 8060525 8063296 Lele25g1215 25 8060525 8063296 CCT
Lele25g1215 25 8060525 8063296 Lele26g1231 26 8038920 8041368 CCT
Lele25g1215 25 8060525 8063296 Lele27g0862 27 16659890 16662680 CCT
Lele25g1215 25 8060525 8063296 Lele28g1224 28 8049182 8052679 CCT
Lele25g1215 25 8060525 8063296 Lele25g1215 25 8060525 8063296 ECH
Lele25g1215 25 8060525 8063296 Lele27g0862 27 16659890 16662680 hybridization
Lele25g1215 25 8060525 8063296 Lele28g1224 28 8049182 8052679 hybridization