Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1213 ATGGACACAGCAGATCCTTCTCGAGCTTTCGTCAAGGACGTTAGGCGCATTGTCATCAAGGTTGGGACTGCTGTCGTGACCCGTAATGATGGAAGATTAGCAGTTGGAAAATTGGGGACGCTCTGTGAGCAGATTAAGGAGCTTAACTCTCTAGGATATGAGGTTATTTTGGTGTCATCTGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATACAGGAAATTACTTCACAGCAGCTTTGCTGATTTACAAAAGCCACATGTTGAACTTGATGGCAAAGCATGCGCAGCAGTTGGACAAAACAGTCTAATGGCCATATATGATGCTTTGTTCACTCAGCTTGATGTGACATCAGCTCAGCTTCTTGTGACAGACAATGATTTTAGAGATAGAGATTTCAGAAAGCAACTTACTGAAACTGTAAAATCTTTGTTAGCACTAAAAGTCATACCCATATTCAATGAAAACGACGCAGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGACAATGACAGTTTATCAGCTTTATTGGCCTTGGAATTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTGGAGGGTCTTTATACTGGCCCTCCAAGTGACCCAAACTCAAGGCTTATTCATACATACCTCAAGGAAAAGCATCAGAATGAAATTACTTTTGGAGAGAAGTCTAGGGTGGGAAGAGGTGGAATGACCGCCAAGGTAAAGGCTTCTGTAAATGCAGCTGAAGCTGGCATTCCTGTTATTGTTACCAGTGGCTATGCACCTGAAAATATCCTTAAAGTCCTTCAAGGACAATGTATTGGAACCCTCTTCCATAAAGATGCTCATAAGTTCGTCCCAGTAAAAGAGGTATCAACACGTGAAATGGCAGTTGCAGCTAAGGACTGCTCTAGACGGCTTCAGGCTTTATCTGAAGAAGAGAGGAAGCAAATTTTGCTAAATATAGCCGATGCACTGGAAGCAAATGAGAAAGAGATCAGGATTGAAAATGAGGCTGATGTCGCTGATGCACAACAAGCAAATCTTGATAAATCCTTGGTTGCTAGGTTGCTTCTAAAGCCTGGGAAGGTTGCAAGCCTTGCAAAGAACATGAGAACTCTTGCAAACATGGAAGATCCAATTGGTCGAGTATTAAAACGAACCGAGGTTGCAGATGGGCTAGTTCTAGAGAAAACATCATCTCCTTTAGGTGTTCTCTTGATTGTTTTTGAGTCCCGCCCTGATGCCCTAGTACAGATAGCTTCCTTGGCAATTCGAAGTGGGAATGGACTTCTCTTGAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAAGTAATTACTGAAGCCATCCCCAAGACTGTTGGTGGAAAACTTATTGGACTTGTGACCTCAAGAGCGGAGATCCCTGAGCTGCTAAAGCTTGATGATGTGATTGATCTAGTTATTCCCCGAGGCAGCAACAAACTTGTCTATAGTATTAAAAGTTCCACTAAAATTCCTGTTCTGGGTCATGCAGATGGAATTTGCCACATCTATGTTGATAATTCTGCTAATATGGAGATGGCTAGGCGGATTGTATTGGATGCAAAAATAGATTATCCAGCTGGTTGCAATGCGATGGAAACACTTCTTGTTCACAAGGACGTAGCAGAGAAAGGTTGGCTCAATGATATTTGTGTTGACCTACGGAATGAAGGCGTTACTTTATATGGAGGACCCAAGGCAAGCACATTGTTAAATATCCCAAAGGCGCCTTCATTTCATCATGAATACAGCTCATTAGCTTGCACTGTTGAAATTGTGGATGATGTGTATTCAGCTATTGATCATATAAATCTTCATGGAAGTGCGCATACTGATTGTATAATTGCTGAAGATTGCAAAGTTGCTGATGTGTTTCTACGCCAAGTGGACAGTGCTGCTGTTTTTCACAATGCTAGCACAAGATTTTGTGATGGGGCACGATTTGGACTGGGTGCAGAGGTTGGAATAAGTACAAGCAGGATTCATGCCCGCGGTCCCGTCGGAGTTGAAGGATTGTTAACAACCAGATGGATACTTAGAGGAAGTGGACAAGTAGTTGATGGAGATAAAGGAGTTGTTTACGCCCACAAAGACCTTACCACTTGA 2148 0.4264 MDTADPSRAFVKDVRRIVIKVGTAVVTRNDGRLAVGKLGTLCEQIKELNSLGYEVILVSSGAVGLGRQRLRYRKLLHSSFADLQKPHVELDGKACAAVGQNSLMAIYDALFTQLDVTSAQLLVTDNDFRDRDFRKQLTETVKSLLALKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYTGPPSDPNSRLIHTYLKEKHQNEITFGEKSRVGRGGMTAKVKASVNAAEAGIPVIVTSGYAPENILKVLQGQCIGTLFHKDAHKFVPVKEVSTREMAVAAKDCSRRLQALSEEERKQILLNIADALEANEKEIRIENEADVADAQQANLDKSLVARLLLKPGKVASLAKNMRTLANMEDPIGRVLKRTEVADGLVLEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPKTVGGKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVYSIKSSTKIPVLGHADGICHIYVDNSANMEMARRIVLDAKIDYPAGCNAMETLLVHKDVAEKGWLNDICVDLRNEGVTLYGGPKASTLLNIPKAPSFHHEYSSLACTVEIVDDVYSAIDHINLHGSAHTDCIIAEDCKVADVFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGSGQVVDGDKGVVYAHKDLTT 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1213 715 PIRSF P5C_synthetase 1 715 IPR005766 GO:0003824|GO:0006561
Lele25g1213 715 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 1 714 - -
Lele25g1213 715 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 302 689 IPR000965 GO:0004350|GO:0006561
Lele25g1213 715 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 607 629 IPR020593 GO:0004350|GO:0006561
Lele25g1213 715 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 512 658 IPR016163 GO:0016620
Lele25g1213 715 FunFam Delta-1-pyrroline-5-carboxylate synthase 512 658 - -
Lele25g1213 715 CDD ALDH_F18-19_ProA-GPR 296 696 IPR000965 GO:0004350|GO:0006561
Lele25g1213 715 Hamap Glutamate 5-kinase [proB]. 15 284 IPR005715 GO:0005737|GO:0006561
Lele25g1213 715 TIGRFAM proB: glutamate 5-kinase 15 286 IPR005715 GO:0005737|GO:0006561
Lele25g1213 715 Pfam Aldehyde dehydrogenase family 296 558 IPR015590 GO:0016491
Lele25g1213 715 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Lele25g1213 715 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Lele25g1213 715 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Lele25g1213 715 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Lele25g1213 715 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Lele25g1213 715 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 8 713 IPR005766 GO:0003824|GO:0006561
Lele25g1213 715 FunFam Delta-1-pyrroline-5-carboxylate synthase 4 287 - -
Lele25g1213 715 Hamap Gamma-glutamyl phosphate reductase [proA]. 294 700 IPR000965 GO:0004350|GO:0006561
Lele25g1213 715 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Lele25g1213 715 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Lele25g1213 715 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 304 698 IPR016162 GO:0016491
Lele25g1213 715 SUPERFAMILY ALDH-like 296 699 IPR016161 GO:0016491
Lele25g1213 715 Pfam Amino acid kinase family 16 260 IPR001048 -
Lele25g1213 715 Gene3D - 5 288 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1213 Lele-ChrLele25 8048935 8056093 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1231 26 8038920 8041368 Lele25g1213 25 8048935 8056093 CCT
Lele27g0862 27 16659890 16662680 Lele25g1213 25 8048935 8056093 CCT
Lele28g1224 28 8049182 8052679 Lele25g1213 25 8048935 8056093 CCT
Lele25g1213 25 8048935 8056093 Lele25g1213 25 8048935 8056093 CCT
Lele25g1213 25 8048935 8056093 Lele26g1229 26 8025783 8034998 CCT
Lele25g1213 25 8048935 8056093 Lele27g0865 27 16671551 16675439 CCT
Lele25g1213 25 8048935 8056093 Lele28g1222 28 8035421 8040302 CCT
Lele25g1213 25 8048935 8056093 Lele27g0853 27 16562536 16569924 CCT
Lele25g1213 25 8048935 8056093 Lele25g1213 25 8048935 8056093 ECH
Lele25g1213 25 8048935 8056093 Lele26g1229 26 8025783 8034998 ECH
Lele25g1213 25 8048935 8056093 Lele27g0865 27 16671551 16675439 hybridization
Lele25g1213 25 8048935 8056093 Lele28g1222 28 8035421 8040302 hybridization