Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1198 ATGGAAGCTTTATCTAAGAAGACTGAGCATTTTCAGAAGAAGAAAGATGGGGTTCGGTCCTCTGGGGGTAAAACGGCTAAATCTGAGTCTTTCACCGATTCCAGTGCCGAGTCGAGAGAGACGAGTTCGAGTGCTTCGAGCTCCTTCGATTCAAGTGAAGAAGCTAAAGCAAAAGGGTCGTCTTCGCCTACTCCTCTTGGCTGGCCCATTTGCAAGGCTACAATTTCCAAGTGCAGTAAATCTGATGACAAGGAAAACCAACCTATTTCCCATGAGGATAGCTCAAACTTTAGCAGAATCGGTTTAAAAATGTCAGAGATTGATATGATGAAGGAAAAGTTTGCAAAATTACTGCTTGGTGAAGATATGTCAGGGTCTGGAAAAGGGGTTTGCACATCTCTGTCCATCTCAAATGCTATTACTAATCTCTGTGCCACCGTATTTGGGCAATTATGGAGACTAGAACCTCTACCGGATGAAAAGAAAGCAATGTGGCGAAGAGAGATGGAGTGGCTTCTTTGCGTTGGTGATCACATTGTTGAATTAATCCCTTCTTGGCAAACATTTCCCGATGGAAGCAAGCTTGAGGTAATGACTTGCAGGCCGAGGTTGGATCTTTTCATGAATCTTCCTGCTCTTCGCAAACTCGACAACATGCTAATGGAAATATTAGAGAGTTTCACAGGTAGGGAGTTTTGGTACGTTGATCAAGGAATTGTGGCCCCAGATTCAGATGGGTCAGGCTCATTTCGGAAGCCAATGCAGAGACAAGAGGAGAAATGGTGGCTTCCTGTGCCTCGCGTGCCTCCTTCAGGTTTGACTGAGAACTCGAGAAAGCAATTGAACCACACACGAGAATGTGCAAACCAAATTCTCAAAGCAGCCATGGCTATCAACGACAATGCTTTAGCTGAAATGGAAGTTCCTGAGTCTTACTTAGAAGCCCTTCCCAAGAATGGAAGAAGCTGTCTGGGGGATTTCATATACCGATACATAACATCAGACCAATTCTCTTCAGAATGTCTGCTTGATTGCCTTGACCTTTCCAATGAACATGTCGCTCTGGAGATTGCTAACAGAGTGGAAGCTTCTATATATGTATGGCGTAGAAGGACTCATTCGAAACCCCCACCTAATAATCCTAGCCGTTCAACAGCAAAATCATCCTGGGAAATGGTCAGAGATTTCATGGCCGATGGAGACAAGAGAGAATTGCTAGCTGAAAGAGCTGAAAACTTTCTGCTTTCCTTGAAACAGAGGTTCCCTGGTTTAACTCAAACCACCCTCGACACCAGCAAGATCCAATGCAACAAGGACGTGGGTAAGTCCATTCTGGAGAGCTACTCAAGGGTATTGGAGAGCATGGCGTTTAACATTCTGGCTCGTATTGATGATTTGCTGTATGTGGACGACTTGACGAAACATTCAGACAGGTTTCCGTTGGTTTCATCGACGGTTGGTCAGCATCCACAGCAGCAGTTGTCTCGTCCAATGTCGGTGTCTGTCTCAGGCACTCCTCACAAATCTGTGAGTGGCACCAATAATAACATCTCACCTGCACCACCGCTCATTAGTCCTGCAAGGGGAGAGAGAACTCCTTTCATCCACAAGAACCACCACAACATCATGAAACCTCATCGTCGTGGTTTTGGGGTGAAAAGGGTGTTGTCGAATTATCTTGGGGTAGATACGAAAGCCAAAATATGCAGCAATTCAAGTGAAGTGAATTGTTTGAACTTAAGTACTGCCAATAGAACAGAAACAGAACAACAACCTGAACGGCCAACGGAATCATCATGTGGTCTGAAAAAATGA 1815 0.449 MEALSKKTEHFQKKKDGVRSSGGKTAKSESFTDSSAESRETSSSASSSFDSSEEAKAKGSSSPTPLGWPICKATISKCSKSDDKENQPISHEDSSNFSRIGLKMSEIDMMKEKFAKLLLGEDMSGSGKGVCTSLSISNAITNLCATVFGQLWRLEPLPDEKKAMWRREMEWLLCVGDHIVELIPSWQTFPDGSKLEVMTCRPRLDLFMNLPALRKLDNMLMEILESFTGREFWYVDQGIVAPDSDGSGSFRKPMQRQEEKWWLPVPRVPPSGLTENSRKQLNHTRECANQILKAAMAINDNALAEMEVPESYLEALPKNGRSCLGDFIYRYITSDQFSSECLLDCLDLSNEHVALEIANRVEASIYVWRRRTHSKPPPNNPSRSTAKSSWEMVRDFMADGDKRELLAERAENFLLSLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNILARIDDLLYVDDLTKHSDRFPLVSSTVGQHPQQQLSRPMSVSVSGTPHKSVSGTNNNISPAPPLISPARGERTPFIHKNHHNIMKPHRRGFGVKRVLSNYLGVDTKAKICSNSSEVNCLNLSTANRTETEQQPERPTESSCGLKK 604
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1198 604 FunFam Rop guanine nucleotide exchange factor 14 339 479 - -
Lele25g1198 604 MobiDBLite consensus disorder prediction 483 529 - -
Lele25g1198 604 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 105 474 IPR005512 GO:0005085
Lele25g1198 604 MobiDBLite consensus disorder prediction 584 604 - -
Lele25g1198 604 MobiDBLite consensus disorder prediction 1 22 - -
Lele25g1198 604 ProSiteProfiles PRONE domain profile. 97 480 IPR005512 GO:0005085
Lele25g1198 604 Gene3D PRONE domain, subdomain 1 100 339 - -
Lele25g1198 604 FunFam Rop guanine nucleotide exchange factor 1 98 338 - -
Lele25g1198 604 MobiDBLite consensus disorder prediction 23 59 - -
Lele25g1198 604 MobiDBLite consensus disorder prediction 483 521 - -
Lele25g1198 604 MobiDBLite consensus disorder prediction 1 63 - -
Lele25g1198 604 Gene3D PRONE domain, subdomain 1 340 479 - -
Lele25g1198 604 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 27 536 IPR038937 GO:0005085
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele25g1198 Lele-ChrLele25 7927298 7929706 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1198 25 7927298 7929706 Lele25g1198 25 7927298 7929706 CCT
Lele25g1198 25 7927298 7929706 Lele26g1205 26 7882069 7884434 CCT
Lele25g1198 25 7927298 7929706 Lele27g0880 27 16794877 16797288 CCT
Lele25g1198 25 7927298 7929706 Lele28g1197 28 7840679 7843305 CCT
Lele26g1196 26 7782278 7786532 Lele25g1198 25 7927298 7929706 CCT
Lele27g0888 27 16880523 16882225 Lele25g1198 25 7927298 7929706 CCT
Lele28g1188 28 7752864 7758577 Lele25g1198 25 7927298 7929706 CCT
Lele25g1190 25 7839753 7841052 Lele25g1198 25 7927298 7929706 CCT
Lele25g1198 25 7927298 7929706 Lele25g1198 25 7927298 7929706 ECH
Lele25g1198 25 7927298 7929706 Lele26g1205 26 7882069 7884434 ECH
Lele25g1198 25 7927298 7929706 Lele27g0880 27 16794877 16797288 hybridization
Lele25g1198 25 7927298 7929706 Lele28g1197 28 7840679 7843305 hybridization