Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1192 ATGGTGGTCACAGAGAAGTCTCATGTTGTTGTTGATATAGTAGTAGACAATGGTGGGCGGCGTAGCAGCTCCGTCGGTGGCGGTGGCGGTGGCGCTGGGGGGCATACAGAAGCAGCCGACAGTGTAGATAAGGAGCAAAAACCCGCCCACGAGGCATCTGGTGTCGATATTGTGGGAGTGCCGGAAAAAGAGAAGGGATCCTCTGCATCGGAGTGTTCGGTGGAGGTGGATTTGGGGAATGCGGTGACTGAAACTCAGGTACATTCGGATGAGGTAATGAAGAGGGATTGTAGGATTTGCCTTCTTAGTATGGATATGACAAATCAAGAATCTGGGAGCATGGAGCTCGGATGTTCTTGCAAGGACGATTTGGTTGCTGCTCACAAGCAATGTGCTGAGGCTTGGTTCAAGATCAAGGGAAACAATTATGCAGGCTCAAAATCCAACTATTTGCGAGTGAATCTAGGGCGAGCCATTGAAACAGAGAAAGTCATAGGAATATCGTATAACCATGATCTAGGAACATGA 528 0.4886 MVVTEKSHVVVDIVVDNGGRRSSSVGGGGGGAGGHTEAADSVDKEQKPAHEASGVDIVGVPEKEKGSSASECSVEVDLGNAVTETQVHSDEVMKRDCRICLLSMDMTNQESGSMELGCSCKDDLVAAHKQCAEAWFKIKGNNYAGSKSNYLRVNLGRAIETEKVIGISYNHDLGT 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1192 175 ProSiteProfiles Zinc finger RING-CH-type profile. 89 154 IPR011016 GO:0008270
Lele25g1192 175 SMART ringv_2 96 143 IPR011016 GO:0008270
Lele25g1192 175 MobiDBLite consensus disorder prediction 14 71 - -
Lele25g1192 175 PANTHER ZINC FINGER, RING-CH-TYPE 31 142 - -
Lele25g1192 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 155 IPR013083 -
Lele25g1192 175 Pfam RING-variant domain 97 141 IPR011016 GO:0008270
Lele25g1192 175 SUPERFAMILY RING/U-box 92 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1192 Lele-ChrLele25 7868745 7869731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1192 60 141 C3H Transcription Factor Family AT5G05830 59.036 2.22e-25 95.5